RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 L2HGDHQ9H9P8 463 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 SLC35C2Q9NQQ7 365 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 GIMAP4Q9NUV9 329 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 TAS2R9Q9NYW1 312 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 PPP4R1LQ9P1A2 415 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 OR10H1Q9Y4A9 318 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 A0A096LNT2 108 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 H0YC42 278 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 UBFD1O14562 309 aaKnown RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 FADS1O60427 444 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 DLX3O60479 287 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 SNRPAP09012 282 aaKnown RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 PEPDP12955 493 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 POU2F1P14859 743 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 HK1P19367 917 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 IMPDH1P20839 514 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 TIA1P31483 386 aaKnown RBP eCLIP8.73□□□□□ -1.01
USP39-212ENST00000465514 EVI2BP34910 448 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 MPIP34949 423 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 KIR2DL2P43627 348 aaPredicted RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 PCYT1AP49585 367 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 HTR6P50406 440 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 SUCLG1P53597 346 aaKnown RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 TPD52P55327 224 aaPredicted RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 CLDN15P56746 228 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 EEFSECP57772 596 aaKnown RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 SIRPAP78324 504 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 ZNF155Q12901 538 aaPredicted RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 HEPACAMQ14CZ8 416 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 PRSS53Q2L4Q9 553 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 SPIN4Q56A73 249 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 SH2D4BQ5SQS7 431 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 SH2D5Q6ZV89 423 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 FAM9CQ8IZT9 166 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 FADS6Q8N9I5 356 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 OR2M3Q8NG83 312 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 OR5M1Q8NGP8 315 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 SGMS2Q8NHU3 365 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 FIG4Q92562 907 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 GTPBP3Q969Y2 492 aaKnown RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 ZMYND19Q96E35 227 aaPredicted RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 TMEM237Q96Q45 408 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 BBS4Q96RK4 519 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 FMO2Q99518 471 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 EBPLQ9BY08 206 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 OPN3Q9H1Y3 402 aaPredicted RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 ESRP2Q9H6T0 727 aaKnown RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 FLRT3Q9NZU0 649 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 MED11Q9P086 117 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 TMEM216Q9P0N5 145 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 SENP1Q9P0U3 644 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 DMGDHQ9UI17 866 aaKnown RBP8.73□□□□□ -1.01
USP39-212ENST00000465514 ZNF337Q9Y3M9 751 aa8.73□□□□□ -1.01
USP39-212ENST00000465514 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.73□□□□□ -1.01
USP39-212ENST00000465514 IGHV4-30-2A0A087WSY4 118 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 A0A087WUV0 522 aaPredicted RBP8.72□□□□□ -1.01
USP39-212ENST00000465514 SERINC4A6NH21 518 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 MYO1GB0I1T2 1018 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 C16orf97H3BN30 126 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 SEC14L5O43304 696 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 NDUFS7O75251 213 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 TNFRSF21O75509 655 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 CGAP01215 116 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 JUNP05412 331 aaKnown RBP8.72□□□□□ -1.01
USP39-212ENST00000465514 ANXA4P09525 319 aaPredicted RBP8.72□□□□□ -1.01
USP39-212ENST00000465514 ATP5F1P24539 256 aaPredicted RBP8.72□□□□□ -1.01
USP39-212ENST00000465514 IGFBP5P24593 272 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 NCBP2P52298 156 aaKnown RBP eCLIP8.72□□□□□ -1.01
USP39-212ENST00000465514 VLDLRP98155 873 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 PSG6Q00889 435 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 C2orf80Q0P641 193 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 STX5Q13190 355 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 CYP27C1Q4G0S4 372 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 BEX5Q5H9J7 111 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 SPDYAQ5MJ70 313 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 LGSNQ5TDP6 509 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 RAET1LQ5VY80 246 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 ANKRD34AQ69YU3 496 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 GALNT18Q6P9A2 607 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 TIFABQ6ZNK6 161 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.72□□□□□ -1.01
USP39-212ENST00000465514 ZNF610Q8N9Z0 462 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 CDC26Q8NHZ8 85 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 DUSP19Q8WTR2 217 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 AKAP1Q92667 903 aaKnown RBP eCLIP8.72□□□□□ -1.01
USP39-212ENST00000465514 C11orf24Q96F05 449 aaPredicted RBP8.72□□□□□ -1.01
USP39-212ENST00000465514 C1orf159Q96HA4 380 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 ZNF845Q96IR2 970 aaPredicted RBP8.72□□□□□ -1.01
USP39-212ENST00000465514 TNFRSF13CQ96RJ3 184 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 KCNA7Q96RP8 456 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 SLC39A3Q9BRY0 314 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 PINK1Q9BXM7 581 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 RTN4RQ9BZR6 473 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 STMN4Q9H169 189 aaPredicted RBP8.72□□□□□ -1.01
USP39-212ENST00000465514 SDHAF3Q9NRP4 125 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 ELOVL5Q9NYP7 299 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 NFU1Q9UMS0 254 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 TIMM22Q9Y584 194 aa8.72□□□□□ -1.01
USP39-212ENST00000465514 CADP27708 2225 aa8.71□□□□□ -1.02
USP39-212ENST00000465514 A0A087WV62 115 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms