RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 C20orf96Q9NUD7 363 aaPredicted RBP8.27□□□□□ -1.09
APP-213ENST00000464867 GPRC5BQ9NZH0 403 aa8.27□□□□□ -1.09
APP-213ENST00000464867 ZNF490Q9ULM2 529 aaPredicted RBP8.27□□□□□ -1.09
APP-213ENST00000464867 ATP23Q9Y6H3 246 aa8.27□□□□□ -1.09
APP-213ENST00000464867 PRAMEF27A3QJZ7 478 aa8.26□□□□□ -1.09
APP-213ENST00000464867 CCT8L1PA6NM43 557 aa8.26□□□□□ -1.09
APP-213ENST00000464867 SAP18O00422 153 aaKnown RBP8.26□□□□□ -1.09
APP-213ENST00000464867 SH3BGRLO75368 114 aa8.26□□□□□ -1.09
APP-213ENST00000464867 PRKRAO75569 313 aaKnown RBP8.26□□□□□ -1.09
APP-213ENST00000464867 TPM3P06753 285 aa8.26□□□□□ -1.09
APP-213ENST00000464867 NR2F6P10588 404 aa8.26□□□□□ -1.09
APP-213ENST00000464867 DRD5P21918 477 aa8.26□□□□□ -1.09
APP-213ENST00000464867 IL12BP29460 328 aa8.26□□□□□ -1.09
APP-213ENST00000464867 SNRPD2P62316 118 aaKnown RBP8.26□□□□□ -1.09
APP-213ENST00000464867 MRPS22P82650 360 aaKnown RBP8.26□□□□□ -1.09
APP-213ENST00000464867 CDK16Q00536 496 aa8.26□□□□□ -1.09
APP-213ENST00000464867 KIF5AQ12840 1032 aa8.26□□□□□ -1.09
APP-213ENST00000464867 KLF1Q13351 362 aaPredicted RBP8.26□□□□□ -1.09
APP-213ENST00000464867 GLYR1Q49A26 553 aaPredicted RBP8.26□□□□□ -1.09
APP-213ENST00000464867 TCHHL1Q5QJ38 904 aaPredicted RBP8.26□□□□□ -1.09
APP-213ENST00000464867 TIMM23BQ5SRD1 257 aa8.26□□□□□ -1.09
APP-213ENST00000464867 PDSS1Q5T2R2 415 aa8.26□□□□□ -1.09
APP-213ENST00000464867 ADNP2Q6IQ32 1131 aa8.26□□□□□ -1.09
APP-213ENST00000464867 MFSD12Q6NUT3 480 aa8.26□□□□□ -1.09
APP-213ENST00000464867 CYP20A1Q6UW02 462 aa8.26□□□□□ -1.09
APP-213ENST00000464867 TFAP2EQ6VUC0 442 aa8.26□□□□□ -1.09
APP-213ENST00000464867 FRA10AC1Q70Z53 315 aa8.26□□□□□ -1.09
APP-213ENST00000464867 PRUNE1Q86TP1 453 aa8.26□□□□□ -1.09
APP-213ENST00000464867 TDRPQ86YL5 185 aa8.26□□□□□ -1.09
APP-213ENST00000464867 WDR75Q8IWA0 830 aaKnown RBP8.26□□□□□ -1.09
APP-213ENST00000464867 BPIFB2Q8N4F0 458 aa8.26□□□□□ -1.09
APP-213ENST00000464867 OR10D3Q8NH80 312 aa8.26□□□□□ -1.09
APP-213ENST00000464867 ALG3Q92685 438 aa8.26□□□□□ -1.09
APP-213ENST00000464867 UBE2E3Q969T4 207 aa8.26□□□□□ -1.09
APP-213ENST00000464867 TMBIM1Q969X1 311 aa8.26□□□□□ -1.09
APP-213ENST00000464867 RGMAQ96B86 450 aa8.26□□□□□ -1.09
APP-213ENST00000464867 CMTM7Q96FZ5 175 aa8.26□□□□□ -1.09
APP-213ENST00000464867 ADOQ96SZ5 270 aa8.26□□□□□ -1.09
APP-213ENST00000464867 VRK1Q99986 396 aaPredicted RBP8.26□□□□□ -1.09
APP-213ENST00000464867 FAM167BQ9BTA0 163 aa8.26□□□□□ -1.09
APP-213ENST00000464867 MS4A8Q9BY19 250 aa8.26□□□□□ -1.09
APP-213ENST00000464867 ITPAQ9BY32 194 aa8.26□□□□□ -1.09
APP-213ENST00000464867 FKRPQ9H9S5 495 aa8.26□□□□□ -1.09
APP-213ENST00000464867 LYARQ9NX58 379 aaKnown RBP8.26□□□□□ -1.09
APP-213ENST00000464867 ASIC3Q9UHC3 531 aa8.26□□□□□ -1.09
APP-213ENST00000464867 PCDHB14Q9Y5E9 798 aa8.26□□□□□ -1.09
APP-213ENST00000464867 GOLGA8QA0A0J9YX86 632 aa8.25□□□□□ -1.09
APP-213ENST00000464867 GOLGA8OA6NCC3 632 aa8.25□□□□□ -1.09
APP-213ENST00000464867 GOLGA8NF8WBI6 632 aa8.25□□□□□ -1.09
APP-213ENST00000464867 GOLGA8RI6L899 631 aa8.25□□□□□ -1.09
APP-213ENST00000464867 LIASO43766 372 aa8.25□□□□□ -1.09
APP-213ENST00000464867 SLITRK5O94991 958 aa8.25□□□□□ -1.09
APP-213ENST00000464867 ERCC1P07992 297 aaPredicted RBP8.25□□□□□ -1.09
APP-213ENST00000464867 TACSTD2P09758 323 aa8.25□□□□□ -1.09
APP-213ENST00000464867 PCNAP12004 261 aa8.25□□□□□ -1.09
APP-213ENST00000464867 DDX5P17844 614 aaKnown RBP8.25□□□□□ -1.09
APP-213ENST00000464867 GGT1P19440 569 aa8.25□□□□□ -1.09
APP-213ENST00000464867 TPSB2P20231 275 aa8.25□□□□□ -1.09
APP-213ENST00000464867 CD22P20273 847 aa8.25□□□□□ -1.09
APP-213ENST00000464867 IL2RGP31785 369 aa8.25□□□□□ -1.09
APP-213ENST00000464867 GDF5P43026 501 aa8.25□□□□□ -1.09
APP-213ENST00000464867 PPICP45877 212 aa8.25□□□□□ -1.09
APP-213ENST00000464867 CDKL1Q00532 357 aa8.25□□□□□ -1.09
APP-213ENST00000464867 RNPS1Q15287 305 aaKnown RBP8.25□□□□□ -1.09
APP-213ENST00000464867 OASLQ15646 514 aaKnown RBP8.25□□□□□ -1.09
APP-213ENST00000464867 TPSAB1Q15661 275 aa8.25□□□□□ -1.09
APP-213ENST00000464867 TSNAXIP1Q2TAA8 658 aa8.25□□□□□ -1.09
APP-213ENST00000464867 KHDRBS2Q5VWX1 349 aaKnown RBP8.25□□□□□ -1.09
APP-213ENST00000464867 OR52E8Q6IFG1 317 aa8.25□□□□□ -1.09
APP-213ENST00000464867 RBMS3Q6XE24 437 aaKnown RBP8.25□□□□□ -1.09
APP-213ENST00000464867 SLC46A3Q7Z3Q1 461 aa8.25□□□□□ -1.09
APP-213ENST00000464867 ZCCHC7Q8N3Z6 543 aaKnown RBP8.25□□□□□ -1.09
APP-213ENST00000464867 CEP112Q8N8E3 955 aa8.25□□□□□ -1.09
APP-213ENST00000464867 TOR1AIP2Q8NFQ8 470 aa8.25□□□□□ -1.09
APP-213ENST00000464867 FBXO17Q96EF6 278 aa8.25□□□□□ -1.09
APP-213ENST00000464867 SORCS2Q96PQ0 1159 aa8.25□□□□□ -1.09
APP-213ENST00000464867 LRRC1Q9BTT6 524 aa8.25□□□□□ -1.09
APP-213ENST00000464867 BRINP2Q9C0B6 783 aa8.25□□□□□ -1.09
APP-213ENST00000464867 SLITRK2Q9H156 845 aa8.25□□□□□ -1.09
APP-213ENST00000464867 CNOT10Q9H9A5 744 aaKnown RBP8.25□□□□□ -1.09
APP-213ENST00000464867 HIF1ANQ9NWT6 349 aa8.25□□□□□ -1.09
APP-213ENST00000464867 PRODH2Q9UF12 536 aa8.25□□□□□ -1.09
APP-213ENST00000464867 SPEF1Q9Y4P9 236 aa8.25□□□□□ -1.09
APP-213ENST00000464867 PCNX3Q9H6A9 2034 aa8.24□□□□□ -1.09
APP-213ENST00000464867 RYR3Q15413 4870 aa8.24□□□□□ -1.09
APP-213ENST00000464867 WASHC1A8K0Z3 465 aa8.24□□□□□ -1.09
APP-213ENST00000464867 TO15178 435 aa8.24□□□□□ -1.09
APP-213ENST00000464867 CXCL13O43927 109 aa8.24□□□□□ -1.09
APP-213ENST00000464867 LYZL6O75951 148 aa8.24□□□□□ -1.09
APP-213ENST00000464867 STAMBPO95630 424 aa8.24□□□□□ -1.09
APP-213ENST00000464867 NTN1O95631 604 aa8.24□□□□□ -1.09
APP-213ENST00000464867 CT62P0C5K7 136 aa8.24□□□□□ -1.09
APP-213ENST00000464867 ZSCAN5DPP0CG00 497 aa8.24□□□□□ -1.09
APP-213ENST00000464867 CD40P25942 277 aa8.24□□□□□ -1.09
APP-213ENST00000464867 GIFP27352 417 aa8.24□□□□□ -1.09
APP-213ENST00000464867 SERPINB1P30740 379 aa8.24□□□□□ -1.09
APP-213ENST00000464867 CLK3P49761 638 aaKnown RBP8.24□□□□□ -1.09
APP-213ENST00000464867 ZNF83P51522 516 aa8.24□□□□□ -1.09
APP-213ENST00000464867 XKP51811 444 aa8.24□□□□□ -1.09
APP-213ENST00000464867 CDKN2DP55273 166 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms