RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 TMEM44Q2T9K0 475 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 KRTAP21-3Q3LHN1 58 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 CCDC153Q494R4 210 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 Q71RC1 249 aaPredicted RBP13.05□□□□□ -0.32
ALMS1-202ENST00000464408 CHMP1BQ7LBR1 199 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 ZNF550Q7Z398 422 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 GGNQ86UU5 652 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 CXorf67Q86X51 503 aaPredicted RBP13.05□□□□□ -0.32
ALMS1-202ENST00000464408 C10orf107Q8IVU9 208 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 CCDC63Q8NA47 563 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 GPR151Q8TDV0 419 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 SLC9A6Q92581 669 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 GIMAP5Q96F15 307 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 FCRL1Q96LA6 429 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 TSSK3Q96PN8 268 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 GATA5Q9BWX5 397 aaPredicted RBP13.05□□□□□ -0.32
ALMS1-202ENST00000464408 RNF122Q9H9V4 155 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 LRTM1Q9HBL6 345 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 SDHAF3Q9NRP4 125 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 VDAC3Q9Y277 283 aa13.05□□□□□ -0.32
ALMS1-202ENST00000464408 TLN2Q9Y4G6 2542 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 NPIPB8E9PQR5 432 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 CASKO14936 926 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 CTIFO43310 598 aaKnown RBP13.04□□□□□ -0.32
ALMS1-202ENST00000464408 TNFRSF21O75509 655 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 NKX2-2O95096 273 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 GOSR1O95249 250 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 OPN1LWP04000 364 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 CRHP06850 196 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 KRT4P19013 534 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 SLC6A8P48029 635 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 PRKAG1P54619 331 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 RPL38P63173 70 aaKnown RBP13.04□□□□□ -0.32
ALMS1-202ENST00000464408 PRR5P85299 388 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 GANABQ14697 944 aaKnown RBP13.04□□□□□ -0.32
ALMS1-202ENST00000464408 GUSBP1Q15486 140 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 OR2A2Q6IF42 318 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 ZNF610Q8N9Z0 462 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 GATSQ8NAP1 163 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 DTNBP1Q96EV8 351 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 C16orf58Q96GQ5 468 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 ZC3HAV1LQ96H79 300 aaKnown RBP13.04□□□□□ -0.32
ALMS1-202ENST00000464408 HS3ST6Q96QI5 342 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 TBL1XR1Q9BZK7 514 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 PTGES2Q9H7Z7 377 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 C1orf109Q9NX04 203 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 GIMAP2Q9UG22 337 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 NDRG3Q9UGV2 375 aa13.04□□□□□ -0.32
ALMS1-202ENST00000464408 FN1P02751 2386 aaKnown RBP13.03□□□□□ -0.32
ALMS1-202ENST00000464408 IGLV3-32A0A0A0MS00 114 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 KIF2AO00139 706 aaPredicted RBP13.03□□□□□ -0.32
ALMS1-202ENST00000464408 COPEO14579 308 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 AZIN1O14977 448 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 EMC8O43402 210 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 KCNH1O95259 989 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 CHRNGP07510 517 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 LINC00032P0C843 101 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 PRPS2P11908 318 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 POU2F1P14859 743 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 GPC1P35052 558 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 UGT2B10P36537 528 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 CCT5P48643 541 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 RNF144AP50876 292 aaPredicted RBP13.03□□□□□ -0.32
ALMS1-202ENST00000464408 DUSP5Q16690 384 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 RFTN2Q52LD8 501 aaPredicted RBP13.03□□□□□ -0.32
ALMS1-202ENST00000464408 LIPMQ5VYY2 423 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 KANK2Q63ZY3 851 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 ANKRD34AQ69YU3 496 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 PPP4R4Q6NUP7 873 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 FIGNL1Q6PIW4 674 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 SZRD1Q7Z422 152 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 METTL25Q8N6Q8 603 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 SLC16A11Q8NCK7 471 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 OR4C3Q8NH37 302 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 NUDT8Q8WV74 236 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 HOXB13Q92826 284 aaPredicted RBP13.03□□□□□ -0.32
ALMS1-202ENST00000464408 PPCDCQ96CD2 204 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 PIK3IP1Q96FE7 263 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 MARK4Q96L34 752 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 NEUROD4Q9HD90 331 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 SH3BP4Q9P0V3 963 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 MRTO4Q9UKD2 239 aaKnown RBP13.03□□□□□ -0.32
ALMS1-202ENST00000464408 CLEC4AQ9UMR7 237 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 EIF3LQ9Y262 564 aaKnown RBP13.03□□□□□ -0.32
ALMS1-202ENST00000464408 WBP11Q9Y2W2 641 aaKnown RBP13.03□□□□□ -0.32
ALMS1-202ENST00000464408 ZNF175Q9Y473 711 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 FREM1Q5H8C1 2179 aa13.03□□□□□ -0.32
ALMS1-202ENST00000464408 H3BQF6 201 aa13.02□□□□□ -0.33
ALMS1-202ENST00000464408 SLC28A1O00337 649 aa13.02□□□□□ -0.33
ALMS1-202ENST00000464408 EIF1AYO14602 144 aaKnown RBP13.02□□□□□ -0.33
ALMS1-202ENST00000464408 RGS14O43566 566 aa13.02□□□□□ -0.33
ALMS1-202ENST00000464408 OXSR1O95747 527 aaPredicted RBP13.02□□□□□ -0.33
ALMS1-202ENST00000464408 FOSL1P15407 271 aa13.02□□□□□ -0.33
ALMS1-202ENST00000464408 LOXP28300 417 aaPredicted RBP13.02□□□□□ -0.33
ALMS1-202ENST00000464408 FRKP42685 505 aaPredicted RBP13.02□□□□□ -0.33
ALMS1-202ENST00000464408 KCNJ5P48544 419 aa13.02□□□□□ -0.33
ALMS1-202ENST00000464408 CLK3P49761 638 aaKnown RBP13.02□□□□□ -0.33
ALMS1-202ENST00000464408 EEFSECP57772 596 aaKnown RBP13.02□□□□□ -0.33
ALMS1-202ENST00000464408 NAA20P61599 178 aa13.02□□□□□ -0.33
ALMS1-202ENST00000464408 EEF1A1P68104 462 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms