RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ASB5Q8WWX0 329 aa11.9□□□□□ -0.51
R3HDM1-213ENST00000463230 SLC35G5Q96KT7 338 aa11.9□□□□□ -0.51
R3HDM1-213ENST00000463230 PRDM14Q9GZV8 571 aa11.9□□□□□ -0.51
R3HDM1-213ENST00000463230 PTGES2Q9H7Z7 377 aa11.9□□□□□ -0.51
R3HDM1-213ENST00000463230 TCF7L2Q9NQB0 619 aa11.9□□□□□ -0.51
R3HDM1-213ENST00000463230 POLE3Q9NRF9 147 aa11.9□□□□□ -0.51
R3HDM1-213ENST00000463230 SPENQ96T58 3664 aaKnown RBP11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 C15orf38-AP3S2A0A0A6YYH1 394 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 PGRP06401 933 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 ATP6V1C1P21283 382 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 CHMP24386 653 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 PHC1P78364 1004 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 C1orf185Q5T7R7 199 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 SAXO2Q658L1 398 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 C6orf120Q7Z4R8 191 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 MTERF4Q7Z6M4 381 aaKnown RBP11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 MRGPRGQ86SM5 289 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 MIER2Q8N344 545 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 ZNF527Q8NB42 609 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 CDS1Q92903 461 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 NEURL3Q96EH8 262 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 OR52B2Q96RD2 323 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 SLCO1B3Q9NPD5 702 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 MED4Q9NPJ6 270 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 PNPLA3Q9NST1 481 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 EXD2Q9NVH0 621 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 DKKL1Q9UK85 242 aa11.89□□□□□ -0.51
R3HDM1-213ENST00000463230 C3orf80F5H4A9 247 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 SCO2O43819 266 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 OXSR1O95747 527 aaPredicted RBP11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 TRPC1P48995 793 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 ATP4BP51164 291 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 STX1BP61266 288 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 TOMM20Q15388 145 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 DCST2Q5T1A1 773 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 AP1ARQ63HQ0 302 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 AAGABQ6PD74 315 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 OR2M3Q8NG83 312 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 OR14L1PQ8NHC6 308 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 NUDT8Q8WV74 236 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 ABTB1Q969K4 478 aaPredicted RBP11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 OR7D2Q96RA2 312 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 OR52E6Q96RD3 313 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 RMND5AQ9H871 391 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 ZNF446Q9NWS9 450 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 COQ3Q9NZJ6 369 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 NUP214P35658 2090 aaPredicted RBP11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 A0A087WZY1 265 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 FAM234BA2RU67 622 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 CLDN1O95832 211 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 CPN1P15169 458 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 MATN1P21941 496 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 IL12AP29459 219 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 KHKP50053 298 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 IDH3AP50213 366 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 BCL2A1Q16548 175 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 EIPR1Q53HC9 387 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 HSP90B2PQ58FF3 399 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 ZNF585AQ6P3V2 769 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 ENPP6Q6UWR7 440 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 B3GNT6Q6ZMB0 384 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 IFNEQ86WN2 208 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 ULK2Q8IYT8 1036 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 RND1Q92730 232 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 CHMP6Q96FZ7 201 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 TEX37Q96LM6 180 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 TIMP4Q99727 224 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 YIPF4Q9BSR8 244 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 UGT2B28Q9BY64 529 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 NMUR2Q9GZQ4 415 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 TAS2R10Q9NYW0 307 aa11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 SPTBN1Q01082 2364 aaKnown RBP11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 SPTAN1Q13813 2472 aaKnown RBP11.88□□□□□ -0.51
R3HDM1-213ENST00000463230 SCDO00767 359 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 CPSF4O95639 269 aaKnown RBP11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 ANGPTL1O95841 491 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 ZCCHC18P0CG32 403 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 HPGDP15428 266 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 BMP7P18075 431 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 DPP4P27487 766 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 RFX3P48380 749 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 WIPI1Q5MNZ9 446 aaPredicted RBP11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 ATAD3BQ5T9A4 648 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 RIPPLY2Q5TAB7 128 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 FIGNL1Q6PIW4 674 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 OR5AK3PQ8NH89 298 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 FBXO30Q8TB52 745 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 PANX1Q96RD7 426 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 FLRT3Q9NZU0 649 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 FBXL2Q9UKC9 423 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 HRH3Q9Y5N1 445 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 FREM3P0C091 2139 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 H3BNH8 94 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 NDUFB5O43674 189 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 CLDN14O95500 239 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 CHRNB4P30926 498 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 POLR2JP52435 117 aaKnown RBP11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 SUMO3P55854 103 aaPredicted RBP11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 GFRA1P56159 465 aa11.87□□□□□ -0.51
R3HDM1-213ENST00000463230 NME5P56597 212 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms