RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 RAC1P63000 192 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 PSPHP78330 225 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 MGAT5Q09328 741 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 FASTKD3Q14CZ7 662 aaKnown RBP6.83□□□□□ -1.32
SMC3-202ENST00000462899 HP1BP3Q5SSJ5 553 aaPredicted RBP6.83□□□□□ -1.32
SMC3-202ENST00000462899 C6orf163Q5TEZ5 329 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 FAM166AQ6J272 317 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 BHLHB9Q6PI77 547 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 LARP4Q71RC2 724 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMC3-202ENST00000462899 GALNT10Q86SR1 603 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 ISCA2Q86U28 154 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 EXOC3L1Q86VI1 746 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 SEMA6DQ8NFY4 1073 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 OR4N2Q8NGD1 307 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 OR10D3Q8NH80 312 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 HSD17B8Q92506 261 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 EFHD2Q96C19 240 aaPredicted RBP6.83□□□□□ -1.32
SMC3-202ENST00000462899 LRRC39Q96DD0 335 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 MSI2Q96DH6 328 aaKnown RBP6.83□□□□□ -1.32
SMC3-202ENST00000462899 ERP27Q96DN0 273 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 MS4A14Q96JA4 679 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 NPAS1Q99742 590 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 HDHD5Q9BXW7 423 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 POTEKPQ9BYX7 375 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 ANKRA2Q9H9E1 313 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 EML4Q9HC35 981 aaKnown RBP6.83□□□□□ -1.32
SMC3-202ENST00000462899 FANCFQ9NPI8 374 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 FAIMQ9NVQ4 179 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 NPAP1Q9NZP6 1156 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 FLRT3Q9NZU0 649 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 MED11Q9P086 117 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 PPP4R1LQ9P1A2 415 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 XPR1Q9UBH6 696 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 OPTCQ9UBM4 332 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 KCNS2Q9ULS6 477 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 ABCG2Q9UNQ0 655 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 SNX8Q9Y5X2 465 aa6.83□□□□□ -1.32
SMC3-202ENST00000462899 C1orf226A1L170 272 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 GOLGA6L10A6NI86 522 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 E7EQL1 145 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 E7ESA3 106 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 UBXN8O00124 270 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 TCF21O43680 179 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 SCO2O43819 266 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 DLX3O60479 287 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 KERAO60938 352 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 DEAF1O75398 565 aaPredicted RBP6.82□□□□□ -1.32
SMC3-202ENST00000462899 PIAS1O75925 651 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 TUBBP07437 444 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 CSNK2A2P19784 350 aaPredicted RBP6.82□□□□□ -1.32
SMC3-202ENST00000462899 PTNP21246 168 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 EPHA1P21709 976 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 USF1P22415 310 aaPredicted RBP6.82□□□□□ -1.32
SMC3-202ENST00000462899 TTKP33981 857 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 FEN1P39748 380 aaKnown RBP6.82□□□□□ -1.32
SMC3-202ENST00000462899 GZMKP49863 264 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 CDH11P55287 796 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 CTBP2P56545 445 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 PSG6Q00889 435 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 IRF9Q00978 393 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 GALNT1Q10472 559 aaPredicted RBP6.82□□□□□ -1.32
SMC3-202ENST00000462899 SQLEQ14534 574 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 LIPNQ5VXI9 398 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 FAM180BQ6P0A1 224 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 TDRPQ86YL5 185 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 METTL4Q8N3J2 472 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 OR52B6Q8NGF0 335 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 RNF128Q8TEB7 428 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 TRPC4APQ8TEL6 797 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 FAM168AQ92567 244 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 HTRA1Q92743 480 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 EXT2Q93063 718 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 TM4SF18Q96CE8 201 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 ZMYND19Q96E35 227 aaPredicted RBP6.82□□□□□ -1.32
SMC3-202ENST00000462899 ADAD1Q96M93 576 aaKnown RBP6.82□□□□□ -1.32
SMC3-202ENST00000462899 SOX7Q9BT81 388 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 MRPL1Q9BYD6 325 aaKnown RBP6.82□□□□□ -1.32
SMC3-202ENST00000462899 ALG9Q9H6U8 611 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 CHODLQ9H9P2 273 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 FOLH1BQ9HBA9 442 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 NGBQ9NPG2 151 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 CBLN4Q9NTU7 201 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 FBXO34Q9NWN3 711 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 PAQR5Q9NXK6 330 aaPredicted RBP6.82□□□□□ -1.32
SMC3-202ENST00000462899 ACOT9Q9Y305 439 aa6.82□□□□□ -1.32
SMC3-202ENST00000462899 A0A0J9YW62 118 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 C7orf72A4D263 438 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 CXorf49A8MYA2 514 aaPredicted RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 ZNF814B7Z6K7 855 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 EIF1AYO14602 144 aaKnown RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 ERAL1O75616 437 aaKnown RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 PSMG1O95456 288 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 NTN1O95631 604 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 PLGP00747 810 aaPredicted RBP6.81□□□□□ -1.32
SMC3-202ENST00000462899 KLK1P06870 262 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 CSF3P09919 207 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 COX5AP20674 150 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 IL12BP29460 328 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 PHEXP78562 749 aa6.81□□□□□ -1.32
SMC3-202ENST00000462899 ILF2Q12905 390 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms