RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 PEX11AO75192 247 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 SLU7O95391 586 aaKnown RBP17.11■□□□□ 0.33
VARS-220ENST00000461874 ANGPTL1O95841 491 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 BPGMP07738 259 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 ACP2P11117 423 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 EPXP11678 715 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 DDX5P17844 614 aaKnown RBP17.11■□□□□ 0.33
VARS-220ENST00000461874 EFNA1P20827 205 aaPredicted RBP17.11■□□□□ 0.33
VARS-220ENST00000461874 MAPK1P28482 360 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 HPCAL1P37235 193 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 MLC1Q15049 377 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 GLYR1Q49A26 553 aaPredicted RBP17.11■□□□□ 0.33
VARS-220ENST00000461874 MFSD12Q6NUT3 480 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 ZCCHC12Q6PEW1 402 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 SZRD1Q7Z422 152 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 UBQLNLQ8IYU4 475 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 MEIOBQ8N635 442 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 SLC16A11Q8NCK7 471 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 OR7A2PQ8NGA2 310 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 OR5M1Q8NGP8 315 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 OR6Y1Q8NGX8 325 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 LINC01560Q8TB33 94 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 FAM110BQ8TC76 370 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 C3orf30Q96M34 536 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 RBM24Q9BX46 236 aaKnown RBP17.11■□□□□ 0.33
VARS-220ENST00000461874 PIGMQ9H3S5 423 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 ZDHHC2Q9UIJ5 367 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 ALG1L2C9J202 215 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 TNFSF13O75888 250 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 KCNK2O95069 426 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 NGFRP08138 427 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 RPL3P39023 403 aaKnown RBP17.1■□□□□ 0.33
VARS-220ENST00000461874 ETV4P43268 484 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 SUCLG1P53597 346 aaKnown RBP17.1■□□□□ 0.33
VARS-220ENST00000461874 EEFSECP57772 596 aaKnown RBP17.1■□□□□ 0.33
VARS-220ENST00000461874 DUSP5Q16690 384 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.1■□□□□ 0.33
VARS-220ENST00000461874 ATP6AP1LQ52LC2 224 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 EXOSC6Q5RKV6 272 aaKnown RBP17.1■□□□□ 0.33
VARS-220ENST00000461874 C6orf136Q5SQH8 315 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 GALNT10Q86SR1 603 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 LUZP2Q86TE4 346 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 MREGQ8N565 214 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 OR4C3Q8NH37 302 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 FBXO30Q8TB52 745 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 FAM120BQ96EK7 910 aaKnown RBP17.1■□□□□ 0.33
VARS-220ENST00000461874 C16orf58Q96GQ5 468 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 PIGQQ9BRB3 760 aa17.1■□□□□ 0.33
VARS-220ENST00000461874 SIRT3Q9NTG7 399 aaPredicted RBP17.1■□□□□ 0.33
VARS-220ENST00000461874 MED12LQ86YW9 2145 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 MTORP42345 2549 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 A0A1W2PNV4 684 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 SLC22A20A6NK97 555 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 H0YC42 278 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 CRHP06850 196 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 ALOX5P09917 674 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 LAMP1P11279 417 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 CD1EP15812 388 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 TBXA2RP21731 343 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 CPA2P48052 419 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 ART1P52961 327 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 IST1P53990 364 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 TPD52P55327 224 aaPredicted RBP17.09■□□□□ 0.33
VARS-220ENST00000461874 PTGR1Q14914 329 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 TMEM44Q2T9K0 475 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 OR2A2Q6IF42 318 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 FIGNL1Q6PIW4 674 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 P4HA3Q7Z4N8 544 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 CDC20BQ86Y33 519 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 NINJ1Q92982 152 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 C1orf50Q9BV19 199 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 LIME1Q9H400 295 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 HHATLQ9HCP6 504 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 GALNT8Q9NY28 637 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.09■□□□□ 0.336e-8■■□□□ 11.5
VARS-220ENST00000461874 PACSIN3Q9UKS6 424 aa17.09■□□□□ 0.33
VARS-220ENST00000461874 V9GYY5 206 aaPredicted RBP17.09■□□□□ 0.33
VARS-220ENST00000461874 A0A1W2PRB8 838 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 A8MXE2 369 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 H3BML4 177 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 NDUFB5O43674 189 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 TNFRSF21O75509 655 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 SKAP2O75563 359 aaPredicted RBP17.08■□□□□ 0.32
VARS-220ENST00000461874 LYPLA1O75608 230 aaPredicted RBP17.08■□□□□ 0.32
VARS-220ENST00000461874 OXSR1O95747 527 aaPredicted RBP17.08■□□□□ 0.32
VARS-220ENST00000461874 LCN1P31025 176 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 PRIM2P49643 509 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 DIO3P55073 304 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 CLDN20P56880 219 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 CPTPQ5TA50 214 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 IL23RQ5VWK5 629 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 ZAR1Q86SH2 424 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 FNDC5Q8NAU1 212 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 FIG4Q92562 907 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 YIPF4Q9BSR8 244 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 ZCCHC3Q9NUD5 404 aaKnown RBP17.08■□□□□ 0.32
VARS-220ENST00000461874 FBXO34Q9NWN3 711 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 ST6GALNAC2Q9UJ37 374 aa17.08■□□□□ 0.32
VARS-220ENST00000461874 AP4B1Q9Y6B7 739 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms