RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 LHX1P48742 406 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 FNTAP49354 379 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 CASP4P49662 377 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 MAZP56270 477 aaKnown RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 ATP5IP56385 69 aaPredicted RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 ACTR3P61158 418 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 YWHAEP62258 255 aaKnown RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 DEFB103AP81534 67 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 CBX1P83916 185 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 SPIBQ01892 262 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 GFPT1Q06210 699 aaPredicted RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 INCA1Q0VD86 236 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 OVGP1Q12889 678 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 ABRQ12979 859 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 SCGB2A2Q13296 93 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 XRCC4Q13426 336 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 KRT31Q15323 416 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 CHRNA6Q15825 494 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 EPC2Q52LR7 807 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 PDLIM3Q53GG5 364 aaPredicted RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 IGSF11Q5DX21 431 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 CST9LP1Q5W188 147 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 SLC8B1Q6J4K2 584 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 DEGS2Q6QHC5 323 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 CD300LGQ6UXG3 332 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 TMEM184AQ6ZMB5 413 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 ERN2Q76MJ5 926 aaKnown RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 ADCK2Q7Z695 626 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 LINC00346Q8IVM7 164 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 ARHGAP24Q8N264 748 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 COLGALT1Q8NBJ5 622 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 NPEPL1Q8NDH3 523 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 BHLHE23Q8NDY6 225 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 FBXL13Q8NEE6 735 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 OR52N5Q8NH56 324 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 ZNF519Q8TB69 540 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 C2orf15Q8WU43 125 aaKnown RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 SMAP2Q8WU79 429 aaPredicted RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 PDCD6IPQ8WUM4 868 aaKnown RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 STARD8Q92502 1023 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 CORO2AQ92828 525 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 SLAMF9Q96A28 289 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 CHMP6Q96FZ7 201 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 PGM2Q96G03 612 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 HPDLQ96IR7 371 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 FAM71F1Q96KD3 344 aaPredicted RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 ZNF560Q96MR9 790 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 RPRD1AQ96P16 312 aaPredicted RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 PANX2Q96RD6 677 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 SELENOSQ9BQE4 189 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 ACBD6Q9BR61 282 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 FNDC11Q9BVV2 318 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 DGCR6LQ9BY27 220 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 POLR1EQ9GZS1 481 aaKnown RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 FAM192AQ9GZU8 254 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 SLC26A1Q9H2B4 701 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 EXO5Q9H790 373 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 TREM1Q9NP99 234 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 FARSBQ9NSD9 589 aaKnown RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 SAMSN1Q9NSI8 373 aaKnown RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 SPHK1Q9NYA1 384 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 WSB2Q9NYS7 404 aaPredicted RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 NUDT4Q9NZJ9 180 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 CNIH4Q9P003 139 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 B3GAT1Q9P2W7 334 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 HMGXB4Q9UGU5 601 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 ADAM28Q9UKQ2 775 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.47□□□□□ -1.85
UBA3-204ENST00000461522 TP53TG3Q9ULZ0 132 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 PPIEQ9UNP9 301 aaKnown RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 CFL2Q9Y281 166 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 TDRKHQ9Y2W6 561 aaKnown RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 MRPS2Q9Y399 296 aaKnown RBP3.47□□□□□ -1.85
UBA3-204ENST00000461522 LAMA3Q16787 3333 aa3.47□□□□□ -1.85
UBA3-204ENST00000461522 TET1Q8NFU7 2136 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 A0A075B6Q4 140 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.46□□□□□ -1.86
UBA3-204ENST00000461522 GOLGA8IPA6NC78 632 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 GOLGA8OA6NCC3 632 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 TRIM49BA6NDI0 452 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 GOLGA8JA6NMD2 632 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 GOLGA8NF8WBI6 632 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 WRBO00258 174 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 SLC33A1O00400 549 aaPredicted RBP3.46□□□□□ -1.86
UBA3-204ENST00000461522 CTDSP2O14595 271 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 DNALI1O14645 258 aaPredicted RBP3.46□□□□□ -1.86
UBA3-204ENST00000461522 PRAMEF11O60813 436 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 HUS1O60921 280 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 CLN5O75503 358 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 RHBDL1O75783 438 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 CSTAP01040 98 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 HLA-DRAP01903 254 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 PCCBP05166 539 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 CA3P07451 260 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 FHP07954 510 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 PAEPP09466 180 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 UROSP10746 265 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 THRBP10828 461 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 ODC1P11926 461 aa3.46□□□□□ -1.86
UBA3-204ENST00000461522 HNRNPA2B1P22626 353 aaKnown RBP3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms