RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 EPHA3P29320 983 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 GAS1P54826 345 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 HBA1P69905 142 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 OCRLQ01968 901 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 TFF3Q07654 80 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 SF3B4Q15427 424 aaKnown RBP eCLIP13.98□□□□□ -0.171e-9■■■■□ 25.2
VARS-219ENST00000461328 TTMPQ5BVD1 217 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 NHSL2Q5HYW2 709 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 CCNJQ5T5M9 372 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 OGFOD2Q6N063 350 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 MARCH3Q86UD3 253 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 ANKRD46Q86W74 232 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 LIX1LQ8IVB5 337 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 CLECL1Q8IZS7 167 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 ACBD4Q8NC06 268 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 VPS37AQ8NEZ2 397 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 LRRC8CQ8TDW0 803 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 ADAMTS15Q8TE58 950 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 RNF138Q8WVD3 245 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 HOXB13Q92826 284 aaPredicted RBP13.98□□□□□ -0.17
VARS-219ENST00000461328 CDS1Q92903 461 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 C14orf79Q96F83 325 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 STACQ99469 402 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 ZBTB18Q99592 522 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 G6PC3Q9BUM1 346 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 ACTRT3Q9BYD9 372 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 PRDM14Q9GZV8 571 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 DSN1Q9H410 356 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 WDR55Q9H6Y2 383 aaPredicted RBP13.98□□□□□ -0.17
VARS-219ENST00000461328 PTGES2Q9H7Z7 377 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 APCP25054 2843 aa13.98□□□□□ -0.17
VARS-219ENST00000461328 ABCA12Q86UK0 2595 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 FBN2P35556 2912 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 HSPB2A8KAH6 182 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 E9PBE3 544 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 H0Y3Z8 333 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 RNASET2O00584 256 aaKnown RBP13.97□□□□□ -0.17
VARS-219ENST00000461328 GMFGO60234 142 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 KCNK2O95069 426 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 ANGPTL1O95841 491 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 EPPINO95925 133 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 ALDOCP09972 364 aaKnown RBP13.97□□□□□ -0.17
VARS-219ENST00000461328 IGFBP2P18065 325 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 MAP3K8P41279 467 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 DSCR4P56555 118 aaPredicted RBP13.97□□□□□ -0.17
VARS-219ENST00000461328 WNT3P56703 355 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 SRYQ05066 204 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 RCAN2Q14206 197 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 HSPB2Q16082 182 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.97□□□□□ -0.17
VARS-219ENST00000461328 DPY19L1Q2PZI1 675 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 SLC25A35Q3KQZ1 300 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 FAM174BQ3ZCQ3 159 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 SPANXN4Q5MJ08 99 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 DCST1Q5T197 706 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 ANXA8L1Q5VT79 327 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 RAET1LQ5VY80 246 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 CDC73Q6P1J9 531 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 AAGABQ6PD74 315 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 ENPP6Q6UWR7 440 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 SEM1Q6ZVN7 128 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 SPATA19Q7Z5L4 167 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 LACC1Q8IV20 430 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 OR8J2Q8NGG1 315 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 PSMA8Q8TAA3 256 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 ZNF75CPQ92670 426 aaPredicted RBP13.97□□□□□ -0.17
VARS-219ENST00000461328 TESCQ96BS2 214 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 SLC35G5Q96KT7 338 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 LURAP1Q96LR2 239 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 TREX2Q9BQ50 279 aaPredicted RBP13.97□□□□□ -0.17
VARS-219ENST00000461328 BTBD2Q9BX70 525 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 DUSP22Q9NRW4 184 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 AIG1Q9NVV5 245 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 MED11Q9P086 117 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 ADGRG4Q8IZF6 3080 aa13.97□□□□□ -0.17
VARS-219ENST00000461328 HMGB1P1B2RPK0 211 aaPredicted RBP13.96□□□□□ -0.17
VARS-219ENST00000461328 SCDO00767 359 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 KLF11O14901 512 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 NDUFB5O43674 189 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 CPSF4O95639 269 aaKnown RBP13.96□□□□□ -0.17
VARS-219ENST00000461328 OXSR1O95747 527 aaPredicted RBP13.96□□□□□ -0.17
VARS-219ENST00000461328 H2AFXP16104 143 aaPredicted RBP13.96□□□□□ -0.17
VARS-219ENST00000461328 HK1P19367 917 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 S100A3P33764 101 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 RPS26P62854 115 aaKnown RBP13.96□□□□□ -0.17
VARS-219ENST00000461328 TLE4Q04727 773 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 GANABQ14697 944 aaKnown RBP13.96□□□□□ -0.17
VARS-219ENST00000461328 NSUN5P2Q63ZY6 315 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 ZAR1Q86SH2 424 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 GATSQ8NAP1 163 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 OR2M3Q8NG83 312 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 PIWIL2Q8TC59 973 aaKnown RBP13.96□□□□□ -0.17
VARS-219ENST00000461328 DUSP19Q8WTR2 217 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 WDYHV1Q96HA8 205 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 TRIB1Q96RU8 372 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 PIGUQ9H490 435 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 VIPAS39Q9H9C1 493 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 HHATLQ9HCP6 504 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 GIN1Q9NXP7 522 aa13.96□□□□□ -0.17
VARS-219ENST00000461328 MYO9AB2RTY4 2548 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms