RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ONECUT1Q9UBC0 465 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 TUBGCP4Q9UGJ1 667 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 PYCARDQ9ULZ3 195 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 AFF2P51816 1311 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 RPAP1Q9BWH6 1393 aaPredicted RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 ITSN1Q15811 1721 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 RGS12O14924 1447 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 FAM135BQ49AJ0 1406 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 A0A075B6Q4 140 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 TRAV26-1A0A087WT03 109 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 FAM240BA0A1B0GVZ2 78 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 NEDD8-MDP1E9PL57 170 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 NPIPB9F8W1W9 429 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 IMPA2O14732 288 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 LCMT2O60294 686 aaKnown RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 FCMRO60667 390 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 DUSP11O75319 330 aaKnown RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 CLDN1O95832 211 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 PRSS56P0CW18 603 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 CCDC130P13994 396 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 SELEP16581 610 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 PSMA2P25787 234 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 CAPGP40121 348 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 RPS27AP62979 156 aaKnown RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 FGL1Q08830 312 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 BST1Q10588 318 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 ZP4Q12836 540 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 ENPP2Q13822 863 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 TFDP1Q14186 410 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 ELAVL3Q14576 367 aaKnown RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 HAGHQ16775 308 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 SGSM1Q2NKQ1 1148 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 BCL7AQ4VC05 210 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 C10orf120Q5SQS8 335 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 BEND6Q5SZJ8 279 aaPredicted RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 CLEC2AQ6UVW9 174 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 Q6ZPB1 254 aaPredicted RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 Q6ZSR9 355 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 SMIM29Q86T20 159 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 SERINC5Q86VE9 423 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 CDR2LQ86X02 465 aaPredicted RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 PSTKQ8IV42 348 aaKnown RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 LSMEM2Q8N112 164 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 OR52K1Q8NGK4 314 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 OR6F1Q8NGZ6 308 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 FBXO25Q8TCJ0 367 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 MIPOL1Q8TD10 442 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 AKR1E2Q96JD6 320 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 CAPNS2Q96L46 248 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 CCNL2Q96S94 520 aaPredicted RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 OMDQ99983 421 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 OVOL2Q9BRP0 275 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 HOXD1Q9GZZ0 328 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 ALG9Q9H6U8 611 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 LPAR2Q9HBW0 351 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 EIF3KQ9UBQ5 218 aaKnown RBP2.52□□□□□ -2.01
HPS3-203ENST00000460822 SEC14L3Q9UDX4 400 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 KIAA1257Q9ULG3 409 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 CACNA1FO60840 1977 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 FANCAO15360 1455 aa2.52□□□□□ -2.01
HPS3-203ENST00000460822 RTL1A6NKG5 1358 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 KIF24Q5T7B8 1368 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 MYO5BQ9ULV0 1848 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 A0A087WW49 117 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 PPIAL4CA0A0B4J2A2 164 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 A0A0J9YVX5 310 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 A0A1B0GUV1 79 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 ZNF724A8MTY0 619 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 LRRTM2O43300 516 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 CTAG2O75638 210 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 ECDO95905 644 aaPredicted RBP2.51□□□□□ -2.01
HPS3-203ENST00000460822 AGTP01019 485 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 IGKV3-20P01619 116 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 TPM3P06753 285 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 PPIAL4GP0DN37 164 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 SLC2A3P11169 496 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 MYOGP15173 224 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 CAPN2P17655 700 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 MX1P20591 662 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 NT5EP21589 574 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 EDNRAP25101 427 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 TSFMP43897 325 aaKnown RBP2.51□□□□□ -2.01
HPS3-203ENST00000460822 FNTAP49354 379 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 DHODHQ02127 395 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 MAP2K1Q02750 393 aaPredicted RBP2.51□□□□□ -2.01
HPS3-203ENST00000460822 TGM3Q08188 693 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 ARHGAP19Q14CB8 494 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 ZRSR1Q15695 479 aaKnown RBP2.51□□□□□ -2.01
HPS3-203ENST00000460822 FAM189A2Q15884 450 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 SSX2Q16385 188 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 HADHQ16836 314 aaKnown RBP2.51□□□□□ -2.01
HPS3-203ENST00000460822 KNOP1Q1ED39 458 aaKnown RBP2.51□□□□□ -2.01
HPS3-203ENST00000460822 ZNF718Q3SXZ3 478 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 UNC50Q53HI1 259 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 TMEM225Q6GV28 225 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 FAM53AQ6NSI3 398 aaPredicted RBP2.51□□□□□ -2.01
HPS3-203ENST00000460822 NET1Q7Z628 596 aaPredicted RBP2.51□□□□□ -2.01
HPS3-203ENST00000460822 TBC1D10CQ8IV04 446 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 ARL14Q8N4G2 192 aa2.51□□□□□ -2.01
HPS3-203ENST00000460822 SPEM1Q8N4L4 309 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms