RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 CACYBPQ9HB71 228 aaKnown RBP16.93■□□□□ 0.3
HPS3-202ENST00000460120 A0A1W2PQF6 199 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 IL7P13232 177 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 LAMP2P13473 410 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 NT5EP21589 574 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 EFNB1P98172 346 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 TNFRSF17Q02223 184 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 ENPP2Q13822 863 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 SHHQ15465 462 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 PYDC2Q56P42 97 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 CPOQ8IVL8 374 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 TRIM48Q8IWZ4 208 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 TMEM52Q8NDY8 209 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 FGF11Q92914 225 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 GAL3ST3Q96A11 431 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 ENKD1Q9H0I2 346 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 OR6C2Q9NZP2 312 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 PLEKHB1Q9UF11 243 aaPredicted RBP16.92■□□□□ 0.3
HPS3-202ENST00000460120 DENND4AQ7Z401 1863 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 FABP12A6NFH5 140 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 PRR19A6NJB7 356 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 UGT2B7P16662 529 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 ENDOUP21128 410 aaKnown RBP16.92■□□□□ 0.3
HPS3-202ENST00000460120 GCGRP47871 477 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 LBX1P52954 281 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 COPZ1P61923 177 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 RAB40BQ12829 278 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 GPR18Q14330 331 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 CDC73Q6P1J9 531 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 PLBD1Q6P4A8 553 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 SLC7A5P1Q8MH63 180 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 IL17RDQ8NFM7 739 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 MOAP1Q96BY2 351 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 TXNDC15Q96J42 360 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 MS4A4EQ96PG1 132 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 SECISBP2Q96T21 854 aaKnown RBP16.92■□□□□ 0.3
HPS3-202ENST00000460120 LYARQ9NX58 379 aaKnown RBP16.92■□□□□ 0.3
HPS3-202ENST00000460120 DOCK8Q8NF50 2099 aa16.92■□□□□ 0.3
HPS3-202ENST00000460120 SLC30A4O14863 429 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 SLC1A3P43003 542 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 PPP1CAP62136 330 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 RPS15AP62244 130 aaKnown RBP16.91■□□□□ 0.3
HPS3-202ENST00000460120 MINDY4Q4G0A6 757 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 KLHL12Q53G59 568 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 C3orf38Q5JPI3 329 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 RASSF6Q6ZTQ3 369 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 KLBQ86Z14 1044 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 PEX5LQ8IYB4 626 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 LINC00471Q8N535 108 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 GRHL3Q8TE85 626 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 ACOT11Q8WXI4 607 aaPredicted RBP16.91■□□□□ 0.3
HPS3-202ENST00000460120 KATNB1Q9BVA0 655 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 TTTY10Q9BZA0 68 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 C20orf141Q9NUB4 165 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 LIPT1Q9Y234 373 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 SURF4O15260 269 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 ETV6P41212 452 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 SHC2P98077 582 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 CSTF1Q05048 431 aaKnown RBP16.91■□□□□ 0.3
HPS3-202ENST00000460120 DEFB110Q30KQ9 67 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 SPRYD4Q8WW59 207 aaPredicted RBP16.91■□□□□ 0.3
HPS3-202ENST00000460120 ISG20L2Q9H9L3 353 aaKnown RBP16.91■□□□□ 0.3
HPS3-202ENST00000460120 H2AFY2Q9P0M6 372 aaPredicted RBP16.91■□□□□ 0.3
HPS3-202ENST00000460120 HEBP2Q9Y5Z4 205 aa16.91■□□□□ 0.3
HPS3-202ENST00000460120 GNB5O14775 395 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 HRO43593 1189 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 B3GALT2O43825 422 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 MRPL3P09001 348 aaKnown RBP16.9■□□□□ 0.3
HPS3-202ENST00000460120 RFX2P48378 723 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 DLX2Q07687 328 aaPredicted RBP16.9■□□□□ 0.3
HPS3-202ENST00000460120 PDZK1Q5T2W1 519 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 WDR88Q6ZMY6 472 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 SRRQ9GZT4 340 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 TCEAL2Q9H3H9 227 aaPredicted RBP16.9■□□□□ 0.3
HPS3-202ENST00000460120 HINT3Q9NQE9 182 aaKnown RBP16.9■□□□□ 0.3
HPS3-202ENST00000460120 DDX28Q9NUL7 540 aaKnown RBP16.9■□□□□ 0.3
HPS3-202ENST00000460120 SYT5O00445 386 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 FGF17O60258 216 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 SUZ12Q15022 739 aaKnown RBP16.9■□□□□ 0.3
HPS3-202ENST00000460120 SF3B4Q15427 424 aaKnown RBP eCLIP16.9■□□□□ 0.3
HPS3-202ENST00000460120 PGGHGQ32M88 737 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 PLK5Q496M5 336 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 PPP2R2DQ66LE6 453 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 FIGLAQ6QHK4 219 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 GDPGP1Q6ZNW5 385 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 MARCH9Q86YJ5 346 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 SIRT6Q8N6T7 355 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 BMFQ96LC9 184 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 OR2A5Q96R48 311 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 CCDC32Q9BV29 185 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 BEX2Q9BXY8 128 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 CALML5Q9NZT1 146 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 KCMF1Q9P0J7 381 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 SNTNA6NMZ2 147 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 CTSBP07858 339 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 PRKAR1BP31321 381 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 RPS7P62081 194 aaKnown RBP16.9■□□□□ 0.3
HPS3-202ENST00000460120 FCRL6Q6DN72 434 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 ZNF438Q7Z4V0 828 aa16.9■□□□□ 0.3
HPS3-202ENST00000460120 GLCCI1Q86VQ1 547 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms