RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 KCNH1O95259 989 aa19.35■□□□□ 0.69
CPNE1-220ENST00000458038 TPD52P55327 224 aaPredicted RBP19.35■□□□□ 0.69
CPNE1-220ENST00000458038 FAM219BQ5XKK7 198 aa19.35■□□□□ 0.69
CPNE1-220ENST00000458038 TRMT10CQ7L0Y3 403 aaKnown RBP19.35■□□□□ 0.69
CPNE1-220ENST00000458038 TRIM46Q7Z4K8 759 aa19.35■□□□□ 0.69
CPNE1-220ENST00000458038 MARCH3Q86UD3 253 aa19.35■□□□□ 0.69
CPNE1-220ENST00000458038 CDC26Q8NHZ8 85 aa19.35■□□□□ 0.69
CPNE1-220ENST00000458038 GSX2Q9BZM3 304 aa19.35■□□□□ 0.69
CPNE1-220ENST00000458038 MID1IP1Q9NPA3 183 aa19.35■□□□□ 0.69
CPNE1-220ENST00000458038 DCDC2Q9UHG0 476 aa19.35■□□□□ 0.69
CPNE1-220ENST00000458038 A0A087WZY1 265 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 UQCRHLA0A096LP55 91 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 UTS2O95399 124 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 ANGPTL1O95841 491 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 ZNF17P17021 662 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 IL11P20809 199 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 TMEM44Q2T9K0 475 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 VPS26BQ4G0F5 336 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 BEX5Q5H9J7 111 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 PLEKHM3Q6ZWE6 761 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 ZNF550Q7Z398 422 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 OR6K3Q8NGY3 331 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 GMPPAQ96IJ6 420 aaPredicted RBP19.34■□□□□ 0.69
CPNE1-220ENST00000458038 KCNA7Q96RP8 456 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 PRRG4Q9BZD6 226 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 RTN4RQ9BZR6 473 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 KLHL4Q9C0H6 718 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 GSTO2Q9H4Y5 243 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 RRAGDQ9NQL2 400 aaPredicted RBP19.34■□□□□ 0.69
CPNE1-220ENST00000458038 GLRX2Q9NS18 164 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 FLRT3Q9NZU0 649 aa19.34■□□□□ 0.69
CPNE1-220ENST00000458038 USF3Q68DE3 2245 aa19.33■□□□□ 0.69
CPNE1-220ENST00000458038 RSL1D1O76021 490 aaKnown RBP19.33■□□□□ 0.68
CPNE1-220ENST00000458038 GCAP28676 217 aa19.33■□□□□ 0.68
CPNE1-220ENST00000458038 GABRA3P34903 492 aa19.33■□□□□ 0.68
CPNE1-220ENST00000458038 NR1H2P55055 460 aa19.33■□□□□ 0.68
CPNE1-220ENST00000458038 CCNYL1Q8N7R7 359 aa19.33■□□□□ 0.68
CPNE1-220ENST00000458038 NOA1Q8NC60 698 aaKnown RBP19.33■□□□□ 0.68
CPNE1-220ENST00000458038 CEP70Q8NHQ1 597 aa19.33■□□□□ 0.68
CPNE1-220ENST00000458038 ZC3HAV1LQ96H79 300 aaKnown RBP19.33■□□□□ 0.68
CPNE1-220ENST00000458038 ZNF764Q96H86 408 aaPredicted RBP19.33■□□□□ 0.68
CPNE1-220ENST00000458038 MCTS1Q9ULC4 181 aaKnown RBP19.33■□□□□ 0.68
CPNE1-220ENST00000458038 AQP8O94778 261 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 PLGP00747 810 aaPredicted RBP19.32■□□□□ 0.68
CPNE1-220ENST00000458038 NGFRP08138 427 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 PRPS2P11908 318 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 PAX1P15863 534 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 LOXP28300 417 aaPredicted RBP19.32■□□□□ 0.68
CPNE1-220ENST00000458038 CTBP2P56545 445 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 PRSS53Q2L4Q9 553 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 NOXRED1Q6NXP6 359 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 GGNQ86UU5 652 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 WDR75Q8IWA0 830 aaKnown RBP19.32■□□□□ 0.68
CPNE1-220ENST00000458038 OR5M1Q8NGP8 315 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 PPP1R14CQ8TAE6 165 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 PERPQ96FX8 193 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 OR10A4Q9H209 315 aa19.32■□□□□ 0.68
CPNE1-220ENST00000458038 C7orf72A4D263 438 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 ALG1L2C9J202 215 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 UBFD1O14562 309 aaKnown RBP19.31■□□□□ 0.68
CPNE1-220ENST00000458038 SS18L1O75177 396 aaPredicted RBP19.31■□□□□ 0.68
CPNE1-220ENST00000458038 CRCPO75575 148 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 MYL2P10916 166 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 PYGBP11216 843 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 LCN1P31025 176 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 EIF1AXP47813 144 aaKnown RBP19.31■□□□□ 0.68
CPNE1-220ENST00000458038 RFX3P48380 749 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 GTF2IRD2BQ6EKJ0 949 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 BEND4Q6ZU67 534 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 SH2D5Q6ZV89 423 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 GTF2IRD2Q86UP8 949 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 STK32CQ86UX6 486 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 HOMEZQ8IX15 550 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 CIARTQ8N365 385 aaPredicted RBP19.31■□□□□ 0.68
CPNE1-220ENST00000458038 GTPBP8Q8N3Z3 284 aaPredicted RBP19.31■□□□□ 0.68
CPNE1-220ENST00000458038 GPR151Q8TDV0 419 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 ACTRT2Q8TDY3 377 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 HOXB13Q92826 284 aaPredicted RBP19.31■□□□□ 0.68
CPNE1-220ENST00000458038 ZBTB8AQ96BR9 441 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 HS3ST6Q96QI5 342 aa19.31■□□□□ 0.68
CPNE1-220ENST00000458038 PSMC3IPQ9P2W1 217 aaPredicted RBP19.31■□□□□ 0.68
CPNE1-220ENST00000458038 EIF1AYO14602 144 aaKnown RBP19.3■□□□□ 0.68
CPNE1-220ENST00000458038 ADAMDEC1O15204 470 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 NDUFB5O43674 189 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 SYNGR4O95473 234 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 MAP3K8P41279 467 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 FOXA1P55317 472 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 SLC29A2Q14542 456 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.3■□□□□ 0.68
CPNE1-220ENST00000458038 EXOC3L2Q2M3D2 409 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 GRAMD1BQ3KR37 738 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 PDSS1Q5T2R2 415 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 ANKRD34AQ69YU3 496 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 APOOLQ6UXV4 268 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 ZYG11AQ6WRX3 759 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 FRMD7Q6ZUT3 714 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 CDRT4Q8N9R6 151 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 ZFP28Q8NHY6 868 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 TMEM171Q8WVE6 324 aa19.3■□□□□ 0.68
CPNE1-220ENST00000458038 CXorf56Q9H5V9 222 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms