RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CCDC3Q9BQI4 270 aa15.52■□□□□ 0.08
CCDC43-202ENST00000457422 GPR174Q9BXC1 333 aa15.52■□□□□ 0.08
CCDC43-202ENST00000457422 SEMA6CQ9H3T2 930 aa15.52■□□□□ 0.08
CCDC43-202ENST00000457422 ISYNA1Q9NPH2 558 aa15.52■□□□□ 0.08
CCDC43-202ENST00000457422 KRCC1Q9NPI7 259 aaPredicted RBP15.52■□□□□ 0.08
CCDC43-202ENST00000457422 POMT2Q9UKY4 750 aa15.52■□□□□ 0.08
CCDC43-202ENST00000457422 GPR52Q9Y2T5 361 aa15.52■□□□□ 0.08
CCDC43-202ENST00000457422 SLCO1B1Q9Y6L6 691 aa15.52■□□□□ 0.08
CCDC43-202ENST00000457422 HYKKA2RU49 373 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 SGK494L7N484 410 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 SURF4O15260 269 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 CTSEP14091 401 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 CPEP16870 476 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 TYRP1P17643 537 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 MYL12AP19105 171 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 GPR4P46093 362 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 MTNR1AP48039 350 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 WNT4P56705 351 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 BNC1Q01954 994 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 HHEXQ03014 270 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 DEFB110Q30KQ9 67 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 ARHGEF39Q8N4T4 335 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 COX18Q8N8Q8 333 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 OR4Q3Q8NH05 313 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 PIK3R3Q92569 461 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 RNFT2Q96EX2 444 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 PRSS27Q9BQR3 290 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 ASPNQ9BXN1 380 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 TEX12Q9BXU0 123 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 POLE3Q9NRF9 147 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 WSB2Q9NYS7 404 aaPredicted RBP15.52■□□□□ 0.07
CCDC43-202ENST00000457422 SLC7A7Q9UM01 511 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 EXOSC1Q9Y3B2 195 aaKnown RBP15.52■□□□□ 0.07
CCDC43-202ENST00000457422 MTCH2Q9Y6C9 303 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 CDH10Q9Y6N8 788 aa15.52■□□□□ 0.07
CCDC43-202ENST00000457422 KRBA1A5PL33 1030 aa15.51■□□□□ 0.07
CCDC43-202ENST00000457422 TRAPPC13A5PLN9 417 aa15.51■□□□□ 0.07
CCDC43-202ENST00000457422 ZNF670-ZNF695F2Z2N8 137 aa15.51■□□□□ 0.07
CCDC43-202ENST00000457422 FMO6PO60774 539 aa15.51■□□□□ 0.07
CCDC43-202ENST00000457422 CT62P0C5K7 136 aa15.51■□□□□ 0.07
CCDC43-202ENST00000457422 BLKP51451 505 aa15.51■□□□□ 0.07
CCDC43-202ENST00000457422 EXOSC7Q15024 291 aaKnown RBP15.51■□□□□ 0.07
CCDC43-202ENST00000457422 AADACL4Q5VUY2 407 aa15.51■□□□□ 0.07
CCDC43-202ENST00000457422 LYSMD2Q8IV50 215 aa15.51■□□□□ 0.07
CCDC43-202ENST00000457422 GALNT12Q8IXK2 581 aa15.51■□□□□ 0.07
CCDC43-202ENST00000457422 ANKRD9Q96BM1 317 aaPredicted RBP15.51■□□□□ 0.07
CCDC43-202ENST00000457422 FBXO34Q9NWN3 711 aa15.51■□□□□ 0.07
CCDC43-202ENST00000457422 KCNE5Q9UJ90 142 aa15.51■□□□□ 0.07
CCDC43-202ENST00000457422 NPIPA5A0A0B4J1W7 369 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 PNMA8CA0A1B0GUJ8 204 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 CDHR4A6H8M9 788 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 B4DGG1 531 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 NPIPA7E9PJI5 369 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 RDH16O75452 317 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 APOL3O95236 402 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 MED26O95402 600 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 CTSBP07858 339 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 NPIPA8P0DM63 369 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 ST6GAL1P15907 406 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 PTNP21246 168 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 RNF144AP50876 292 aaPredicted RBP15.5■□□□□ 0.07
CCDC43-202ENST00000457422 PGGHGQ32M88 737 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 TBC1D25Q3MII6 688 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 MRPL2Q5T653 305 aaKnown RBP15.5■□□□□ 0.07
CCDC43-202ENST00000457422 CCDC190Q86UF4 302 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 RNF113BQ8IZP6 322 aaKnown RBP15.5■□□□□ 0.07
CCDC43-202ENST00000457422 PARP16Q8N5Y8 322 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 FAM174AQ8TBP5 190 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 ZDHHC1Q8WTX9 485 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 RFKQ969G6 155 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 ORAI3Q9BRQ5 295 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 CNPPD1Q9BV87 410 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 NUAK2Q9H093 628 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 EVA1AQ9H8M9 152 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 FAM60AQ9NP50 221 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 EXOSC4Q9NPD3 245 aaKnown RBP15.5■□□□□ 0.07
CCDC43-202ENST00000457422 C2orf42Q9NWW7 574 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 CHCHD3Q9NX63 227 aaKnown RBP15.5■□□□□ 0.07
CCDC43-202ENST00000457422 QPCTLQ9NXS2 382 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 DOLKQ9UPQ8 538 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 CARD8Q9Y2G2 431 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 TMEM131Q92545 1883 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 A0A1W2PPC4 97 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 STK25O00506 426 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 BRINP1O60477 761 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 SOX30O94993 753 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 SLC35E2P0CK97 266 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 PRG2P13727 222 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 HTR2AP28223 471 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 LIPKQ5VXJ0 399 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 SLC30A6Q6NXT4 461 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 PARGQ86W56 976 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 TRMT61AQ96FX7 289 aaKnown RBP15.5■□□□□ 0.07
CCDC43-202ENST00000457422 NEURL2Q9BR09 285 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 SP140LQ9H930 580 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 CRNNQ9UBG3 495 aaPredicted RBP15.5■□□□□ 0.07
CCDC43-202ENST00000457422 KLHL3Q9UH77 587 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 SSR3Q9UNL2 185 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 CLCA2Q9UQC9 943 aa15.5■□□□□ 0.07
CCDC43-202ENST00000457422 WWP2O00308 870 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms