RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 VAPAQ9P0L0 249 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 ADAM21Q9UKJ8 722 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 NDUFAF1Q9Y375 327 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 GMEB1Q9Y692 573 aa9.19□□□□□ -0.94
ATG4A-206ENST00000457035 PRAMEF25A6NGN4 478 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 B4DXG7 233 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 NPIPA5E9PKD4 350 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 CLIC1O00299 241 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 HMGN4O00479 90 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 FBP2O00757 339 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 ASNA1O43681 348 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 HS6ST1O60243 411 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 FCMRO60667 390 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 ANP32DO95626 131 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 NGFRP08138 427 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 EDN3P14138 238 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 ZNF24P17028 368 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 TBXA2RP21731 343 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 EVI2BP34910 448 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 MAGEA8P43361 318 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 RFX3P48380 749 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 KCNJ2P63252 427 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 TXNL4AP83876 142 aaKnown RBP9.18□□□□□ -0.94
ATG4A-206ENST00000457035 GRAMD1BQ3KR37 738 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 KRTCAP3Q53RY4 240 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 CMPK2Q5EBM0 449 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 DCST2Q5T1A1 773 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 TIGD3Q6B0B8 471 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 DNAJC14Q6Y2X3 702 aaPredicted RBP9.18□□□□□ -0.94
ATG4A-206ENST00000457035 BNC2Q6ZN30 1099 aaPredicted RBP9.18□□□□□ -0.94
ATG4A-206ENST00000457035 MTDHQ86UE4 582 aaKnown RBP9.18□□□□□ -0.94
ATG4A-206ENST00000457035 TMEM251Q8N6I4 163 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 ST6GALNAC3Q8NDV1 305 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 AURKBQ96GD4 344 aaPredicted RBP9.18□□□□□ -0.94
ATG4A-206ENST00000457035 GNRHR2Q96P88 292 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 CCT8L2Q96SF2 557 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 G6PC3Q9BUM1 346 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 CCDC106Q9BWC9 280 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 OSBPL11Q9BXB4 747 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 NSRP1Q9H0G5 558 aaKnown RBP9.18□□□□□ -0.94
ATG4A-206ENST00000457035 MYLK2Q9H1R3 596 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 TSPAN10Q9H1Z9 355 aaPredicted RBP9.18□□□□□ -0.94
ATG4A-206ENST00000457035 UBQLN3Q9H347 655 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 KLRF1Q9NZS2 232 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 ARMCX1Q9P291 453 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 LEF1Q9UJU2 399 aaPredicted RBP9.18□□□□□ -0.94
ATG4A-206ENST00000457035 BOKQ9UMX3 212 aaPredicted RBP9.18□□□□□ -0.94
ATG4A-206ENST00000457035 NPIPA1Q9UND3 350 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 HRH3Q9Y5N1 445 aa9.18□□□□□ -0.94
ATG4A-206ENST00000457035 PHF3Q92576 2039 aaKnown RBP9.17□□□□□ -0.94
ATG4A-206ENST00000457035 MAST4O15021 2626 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 USP9XQ93008 2570 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-206ENST00000457035 LOC100653049A0A140TA62 436 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 C17orf51A8MQB3 221 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 FAM166BA8MTA8 275 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 ALG1L2C9J202 215 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 NPIPB9F8W1W9 429 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 SLC22A2O15244 555 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 CCDC22O60826 627 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 SHOX2O60902 331 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-206ENST00000457035 KRT34O76011 436 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 OXSR1O95747 527 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-206ENST00000457035 AGR2O95994 175 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 AK1P00568 194 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 GUSBP08236 651 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 MAGEA5P43359 124 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 PLGLB1Q02325 96 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 FUT5Q11128 374 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 SLC10A1Q14973 349 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 RGNQ15493 299 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 MAPK11Q15759 364 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 RUNDC3AQ59EK9 446 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.17□□□□□ -0.94
ATG4A-206ENST00000457035 OLIG3Q7RTU3 272 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 MARCH3Q86UD3 253 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 SLC22A16Q86VW1 577 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 CHERPQ8IWX8 916 aaKnown RBP9.17□□□□□ -0.94
ATG4A-206ENST00000457035 OR1J4Q8NGS1 313 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 PNPT1Q8TCS8 783 aaKnown RBP9.17□□□□□ -0.94
ATG4A-206ENST00000457035 ROPN1LQ96C74 230 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 ZG16BQ96DA0 208 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 JSRP1Q96MG2 331 aaPredicted RBP9.17□□□□□ -0.94
ATG4A-206ENST00000457035 GPR137Q96N19 417 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 SAP130Q9H0E3 1048 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 DEFB127Q9H1M4 99 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 ACKR4Q9NPB9 350 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 UBQLN4Q9NRR5 601 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 EXD2Q9NVH0 621 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 QPCTLQ9NXS2 382 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 KCNE5Q9UJ90 142 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 ABCG2Q9UNQ0 655 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 WIF1Q9Y5W5 379 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 SPTAN1Q13813 2472 aaKnown RBP9.17□□□□□ -0.94
ATG4A-206ENST00000457035 MPDZO75970 2070 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 ARHGAP21Q5T5U3 1957 aa9.17□□□□□ -0.94
ATG4A-206ENST00000457035 NPIPA5A0A0B4J1W7 369 aa9.16□□□□□ -0.94
ATG4A-206ENST00000457035 A0A1W2PQD3 144 aa9.16□□□□□ -0.94
ATG4A-206ENST00000457035 ANKUB1A6NFN9 424 aa9.16□□□□□ -0.94
ATG4A-206ENST00000457035 NPIPA7E9PJI5 369 aa9.16□□□□□ -0.94
ATG4A-206ENST00000457035 ACOT7O00154 380 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms