RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 NRF1Q16656 503 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 DECR1Q16698 335 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 CYP27C1Q4G0S4 372 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 TECRLQ5HYJ1 363 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 FAM219BQ5XKK7 198 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 MFSD12Q6NUT3 480 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 FBF1Q8TES7 1133 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 ADGRG7Q96K78 797 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 GPR78Q96P69 363 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 TNFRSF13CQ96RJ3 184 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 TBL1XR1Q9BZK7 514 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 TRIM2Q9C040 744 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 SHARPINQ9H0F6 387 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 NMRK1Q9NWW6 199 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 TMEM160Q9NX00 188 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 ANK2Q01484 3957 aa20.69■□□□□ 0.9
PTPRA-208ENST00000455631 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.69■□□□□ 0.99e-12■■■■■ 64.7
PTPRA-208ENST00000455631 CCDC188H7C350 402 aa20.68■□□□□ 0.9
PTPRA-208ENST00000455631 TNFSF11O14788 317 aa20.68■□□□□ 0.9
PTPRA-208ENST00000455631 DLX3O60479 287 aa20.68■□□□□ 0.9
PTPRA-208ENST00000455631 CD8AP01732 235 aa20.68■□□□□ 0.9
PTPRA-208ENST00000455631 ZNF17P17021 662 aa20.68■□□□□ 0.9
PTPRA-208ENST00000455631 ADH6P28332 368 aa20.68■□□□□ 0.9
PTPRA-208ENST00000455631 DNAJC14Q6Y2X3 702 aaPredicted RBP20.68■□□□□ 0.9
PTPRA-208ENST00000455631 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.68■□□□□ 0.9
PTPRA-208ENST00000455631 CREG2Q8IUH2 290 aa20.68■□□□□ 0.9
PTPRA-208ENST00000455631 GABRG1Q8N1C3 465 aa20.68■□□□□ 0.9
PTPRA-208ENST00000455631 FAIMQ9NVQ4 179 aa20.68■□□□□ 0.9
PTPRA-208ENST00000455631 SNX6Q9UNH7 406 aa20.68■□□□□ 0.9
PTPRA-208ENST00000455631 NTN1O95631 604 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 ANGPTL1O95841 491 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 VLDLRP98155 873 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 C17orf67Q0P5P2 114 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 NAB1Q13506 487 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 SFRP5Q5T4F7 317 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 LETMD1Q6P1Q0 360 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 CLEC2AQ6UVW9 174 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 TFAP2EQ6VUC0 442 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 RPS27LQ71UM5 84 aaKnown RBP20.67■□□□□ 0.9
PTPRA-208ENST00000455631 OR2V1Q8NHB1 315 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 HSD17B8Q92506 261 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 SLC9A6Q92581 669 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 MRRFQ96E11 262 aaKnown RBP20.67■□□□□ 0.9
PTPRA-208ENST00000455631 TMEM185BQ9H7F4 350 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 Q9N2J8 555 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 SLC35C2Q9NQQ7 365 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 CISD1Q9NZ45 108 aaKnown RBP20.67■□□□□ 0.9
PTPRA-208ENST00000455631 MCM8Q9UJA3 840 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 MRTO4Q9UKD2 239 aaKnown RBP20.67■□□□□ 0.9
PTPRA-208ENST00000455631 B3GALT5Q9Y2C3 310 aa20.67■□□□□ 0.9
PTPRA-208ENST00000455631 YLPM1P49750 1951 aaKnown RBP20.66■□□□□ 0.9
PTPRA-208ENST00000455631 IGLV3-32A0A0A0MS00 114 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 GNG14A0A1W2PPG7 69 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 STX16-NPEPL1H3BU86 382 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 STX16O14662 325 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 PCDH7O60245 1069 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 IL33O95760 270 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 ZNF16P17020 682 aaPredicted RBP20.66■□□□□ 0.9
PTPRA-208ENST00000455631 PTNP21246 168 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 MPIP34949 423 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 HBMQ6B0K9 141 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 GTF2IRD2BQ6EKJ0 949 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 GTF2IRD2Q86UP8 949 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 DTX2Q86UW9 622 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 BANPQ8N9N5 519 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 OR10H5Q8NGA6 315 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 KISS1RQ969F8 398 aaPredicted RBP20.66■□□□□ 0.9
PTPRA-208ENST00000455631 POTEKPQ9BYX7 375 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 VPS11Q9H270 941 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 VPS29Q9UBQ0 182 aa20.66■□□□□ 0.9
PTPRA-208ENST00000455631 CADP27708 2225 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 DPRXA6NFQ7 191 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 UBFD1O14562 309 aaKnown RBP20.65■□□□□ 0.9
PTPRA-208ENST00000455631 ADAMDEC1O15204 470 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 RAMP1O60894 148 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 UTS2O95399 124 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 OTCP00480 354 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 CDH11P55287 796 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 C21orf58P58505 322 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 LOXL1Q08397 574 aaPredicted RBP20.65■□□□□ 0.9
PTPRA-208ENST00000455631 TMEM201Q5SNT2 666 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 ESPNLQ6ZVH7 1005 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 EXOC3L1Q86VI1 746 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 CCDC25Q86WR0 208 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 PIWIL2Q8TC59 973 aaKnown RBP20.65■□□□□ 0.9
PTPRA-208ENST00000455631 ADAD1Q96M93 576 aaKnown RBP20.65■□□□□ 0.9
PTPRA-208ENST00000455631 BBS4Q96RK4 519 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 NPAS1Q99742 590 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 GRIP2Q9C0E4 1043 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 TMCO1Q9UM00 188 aa20.65■□□□□ 0.9
PTPRA-208ENST00000455631 HMX2A2RU54 273 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 PPP6CO00743 305 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 NDUFB5O43674 189 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 TSPAN8P19075 237 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 TYK2P29597 1187 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 SERPINB8P50452 374 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 PSMD4P55036 377 aaKnown RBP20.64■□□□□ 0.89
PTPRA-208ENST00000455631 CSTF3Q12996 717 aaKnown RBP20.64■□□□□ 0.89
PTPRA-208ENST00000455631 HEPACAMQ14CZ8 416 aa20.64■□□□□ 0.89
PTPRA-208ENST00000455631 UAP1Q16222 522 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms