RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 ZNF704Q6ZNC4 412 aaPredicted RBP7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 BEND4Q6ZU67 534 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 ZNF550Q7Z398 422 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 GTF2IRD2Q86UP8 949 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 WDR75Q8IWA0 830 aaKnown RBP7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 PLD6Q8N2A8 252 aaKnown RBP7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 MMGT1Q8N4V1 131 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 ZNF611Q8N823 705 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 CDYL2Q8N8U2 506 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 ZNF610Q8N9Z0 462 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 PPP1R14CQ8TAE6 165 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 METTL6Q8TCB7 284 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 TRMT61AQ96FX7 289 aaKnown RBP7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 GMPPAQ96IJ6 420 aaPredicted RBP7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 TACO1Q9BSH4 297 aaKnown RBP7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 HDHD5Q9BXW7 423 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 NGBQ9NPG2 151 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 MIEF1Q9NQG6 463 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 PLSCR4Q9NRQ2 329 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 DDX18Q9NVP1 670 aaKnown RBP7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 SIRT5Q9NXA8 310 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 MED11Q9P086 117 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 HEY2Q9UBP5 337 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 ZNF180Q9UJW8 692 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 GPR52Q9Y2T5 361 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 ZNF337Q9Y3M9 751 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 PCNX3Q9H6A9 2034 aa7.21□□□□□ -1.26
NIF3L1-209ENST00000454952 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 A8MT66 165 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 KIAA1324LA8MWY0 1029 aaPredicted RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 MYO1GB0I1T2 1018 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 SS18L1O75177 396 aaPredicted RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 CRLF1O75462 422 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 SUPT7LO94864 414 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 OR4F21O95013 312 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 IL33O95760 270 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 IFNA2P01563 188 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 TP53P04637 393 aaPredicted RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 ANXA4P09525 319 aaPredicted RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 ME2P23368 584 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 LOXP28300 417 aaPredicted RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 LCN1P31025 176 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 GPC1P35052 558 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 NCBP2P52298 156 aaKnown RBP eCLIP7.2□□□□□ -1.263e-10■■□□□ 11.4
NIF3L1-209ENST00000454952 SUCLG1P53597 346 aaKnown RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 NAA20P61599 178 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 RPS4XP62701 263 aaKnown RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 PRR5P85299 388 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 PSG6Q00889 435 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 DMTNQ08495 405 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 STX5Q13190 355 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 EXOC3L2Q2M3D2 409 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 VPS26BQ4G0F5 336 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 SH2D4BQ5SQS7 431 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 C8orf74Q6P047 294 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 FAM180BQ6P0A1 224 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 DNAJC14Q6Y2X3 702 aaPredicted RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 IKBIPQ70UQ0 350 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 SSX8Q7RTT4 187 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 ZNF572Q7Z3I7 529 aaPredicted RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 SLC22A9Q8IVM8 553 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 STEAP2Q8NFT2 490 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 OR7G2Q8NG99 324 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 FAM76AQ8TAV0 307 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 C16orf78Q8WTQ4 265 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 DUSP19Q8WTR2 217 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 GTPBP3Q969Y2 492 aaKnown RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 ZBTB8AQ96BR9 441 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 HBEGFQ99075 208 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 PAFAH2Q99487 392 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 MDFIQ99750 246 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 ACPTQ9BZG2 426 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 GRIP2Q9C0E4 1043 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 SAP130Q9H0E3 1048 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 GRPEL1Q9HAV7 217 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 TIGARQ9NQ88 270 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 ZDHHC18Q9NUE0 388 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 TAS2R7Q9NYW3 318 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 NINJ2Q9NZG7 142 aa7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 C19orf53Q9UNZ5 99 aaPredicted RBP7.2□□□□□ -1.26
NIF3L1-209ENST00000454952 ABCA1O95477 2261 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 SERTM1A2A2V5 107 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 C7orf72A4D263 438 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 GJE1A6NN92 205 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 TRIM49D1C9J1S8 452 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 EIF1AYO14602 144 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 KLF4O43474 513 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 UTS2O95399 124 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 PSMG1O95456 288 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 HSPA4LO95757 839 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 JUNP05412 331 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 TUBBP07437 444 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 NGFRP08138 427 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 SNRPAP09012 282 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 PSMB1P20618 241 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 IMPDH1P20839 514 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 ATP5F1P24539 256 aaPredicted RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 IDUAP35475 653 aa7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 EIF1P41567 113 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-209ENST00000454952 EIF1AXP47813 144 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms