RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 HSD17B8Q92506 261 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 EXOSC8Q96B26 276 aaKnown RBP12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 ZBTB8AQ96BR9 441 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 C11orf24Q96F05 449 aaPredicted RBP12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 ZBED6CLQ96FA7 236 aaPredicted RBP12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 NSUN5Q96P11 429 aaKnown RBP12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 MRPL57Q9BQC6 102 aaKnown RBP12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 VPS11Q9H270 941 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 SLCO5A1Q9H2Y9 848 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 TMEM160Q9NX00 188 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 SIRT5Q9NXA8 310 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 TAS2R7Q9NYW3 318 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 XPR1Q9UBH6 696 aa12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 C19orf53Q9UNZ5 99 aaPredicted RBP12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 WBP11Q9Y2W2 641 aaKnown RBP12.78□□□□□ -0.36
LYSMD3-202ENST00000453259 CCDC151A5D8V7 595 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 A8MV72 311 aaPredicted RBP12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 MYO1GB0I1T2 1018 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 EIF1AYO14602 144 aaKnown RBP12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 PLAUP00749 431 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 C8BP07358 591 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 CD3EP07766 207 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 NGFRP08138 427 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 PYGBP11216 843 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 NID1P14543 1247 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 ME2P23368 584 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 RAC1P63000 192 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 ACSM2AQ08AH3 577 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 STX5Q13190 355 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 P2RY6Q15077 328 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 RNPS1Q15287 305 aaKnown RBP12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 NCMAPQ5T1S8 102 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 ACSM2BQ68CK6 577 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 FAM180BQ6P0A1 224 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 OR2L13Q8N349 312 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 OR10D3Q8NH80 312 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 ACTRT2Q8TDY3 377 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 SMAP2Q8WU79 429 aaPredicted RBP12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 ADGRG7Q96K78 797 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 BBS4Q96RK4 519 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 MRPL46Q9H2W6 279 aaKnown RBP12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 ANKRA2Q9H9E1 313 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 ABCA1O95477 2261 aa12.77□□□□□ -0.37
LYSMD3-202ENST00000453259 A0A1W2PP18 115 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 MANBAO00462 879 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 RAD51CO43502 376 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 ULK1O75385 1050 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 KCNH1O95259 989 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 ANGPTL1O95841 491 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 DDCP20711 480 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 ADH6P28332 368 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 AGTR1P30556 359 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 LCN1P31025 176 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 TIA1P31483 386 aaKnown RBP eCLIP12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 DSCR9P59020 149 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 ZNF672Q499Z4 452 aaPredicted RBP12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 VPS26BQ4G0F5 336 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 TCHHL1Q5QJ38 904 aaPredicted RBP12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 SPATA4Q8NEY3 305 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 HS6ST2Q96MM7 605 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 ZNF382Q96SR6 550 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 LMF2Q9BU23 707 aaKnown RBP12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 ALG2Q9H553 416 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 ACSS3Q9H6R3 686 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 L2HGDHQ9H9P8 463 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 TIGARQ9NQ88 270 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 YAE1D1Q9NRH1 226 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 DDX18Q9NVP1 670 aaKnown RBP12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 LPAR3Q9UBY5 353 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 LIPT1Q9Y234 373 aa12.76□□□□□ -0.37
LYSMD3-202ENST00000453259 ALG1L2C9J202 215 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 SOD3P08294 240 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 NTSP30990 170 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 SLC6A8P48029 635 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 SERPINB9P50453 376 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 ZNF763Q0D2J5 394 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 UAP1Q16222 522 aaPredicted RBP12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 CTU2Q2VPK5 515 aaKnown RBP12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 SH2D4BQ5SQS7 431 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 PPP4R4Q6NUP7 873 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 MARCH3Q86UD3 253 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 DTX2Q86UW9 622 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 TDRPQ86YL5 185 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 MISPQ8IVT2 679 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 GABRG1Q8N1C3 465 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 PLD6Q8N2A8 252 aaKnown RBP12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 OR5M1Q8NGP8 315 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 OR2V1Q8NHB1 315 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 LILRB1Q8NHL6 650 aaPredicted RBP12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 C16orf78Q8WTQ4 265 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 S100PBPQ96BU1 408 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 MS4A3Q96HJ5 214 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 REXO5Q96IC2 774 aaKnown RBP12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 POTEKPQ9BYX7 375 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 AMBRA1Q9C0C7 1298 aa12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 MAGED1Q9Y5V3 778 aaPredicted RBP12.75□□□□□ -0.37
LYSMD3-202ENST00000453259 NBEAL1Q6ZS30 2694 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 SERTM1A2A2V5 107 aa12.74□□□□□ -0.37
LYSMD3-202ENST00000453259 C17orf51A8MQB3 221 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms