RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 METTL25Q8N6Q8 603 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 Q8NA96 180 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 C11orf65Q8NCR3 313 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 LSM14AQ8ND56 463 aaKnown RBP11.96□□□□□ -0.49
VPS33A-202ENST00000451053 CHDHQ8NE62 594 aaPredicted RBP11.96□□□□□ -0.49
VPS33A-202ENST00000451053 POP5Q969H6 163 aaKnown RBP11.96□□□□□ -0.49
VPS33A-202ENST00000451053 PNPLA2Q96AD5 504 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 LRGUKQ96M69 825 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 TMEM38AQ9H6F2 299 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 DEPPQ9NTK1 212 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 EXD2Q9NVH0 621 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 MRTO4Q9UKD2 239 aaKnown RBP11.96□□□□□ -0.49
VPS33A-202ENST00000451053 POMPQ9Y244 141 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 PCDHGB3Q9Y5G1 929 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 SNX13Q9Y5W8 968 aa11.96□□□□□ -0.49
VPS33A-202ENST00000451053 ITPR1Q14643 2758 aa11.96□□□□□ -0.5
VPS33A-202ENST00000451053 KMT2BQ9UMN6 2715 aaPredicted RBP11.95□□□□□ -0.5
VPS33A-202ENST00000451053 ABCB7O75027 752 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 TNFRSF21O75509 655 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 UTS2O95399 124 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 ZIC2O95409 532 aaPredicted RBP11.95□□□□□ -0.5
VPS33A-202ENST00000451053 GZMMP51124 257 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 GPR85P60893 370 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 KLRB1Q12918 225 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 NFATC3Q12968 1075 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 VEZF1Q14119 521 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 EFR3AQ14156 821 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 FLOT2Q14254 428 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 SYPL1Q16563 259 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 VMACQ2NL98 169 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 ARHGAP11BQ3KRB8 267 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 MTX3Q5HYI7 312 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 ATAD3BQ5T9A4 648 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 INTS11Q5TA45 600 aaKnown RBP11.95□□□□□ -0.5
VPS33A-202ENST00000451053 SLC22A10Q63ZE4 541 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 C16orf62Q7Z3J2 963 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 GALNTL5Q7Z4T8 443 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 DHFR2Q86XF0 187 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 SULF2Q8IWU5 870 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 ZZZ3Q8IYH5 903 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 ANKFN1Q8N957 763 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 TEX19Q8NA77 164 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 TMEM178AQ8NBL3 297 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 GRHL3Q8TE85 626 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 SLC39A7Q92504 469 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 SDF2Q99470 211 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 PIF1Q9H611 641 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 PROK2Q9HC23 129 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 A4GALTQ9NPC4 353 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 SACM1LQ9NTJ5 587 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 ACTR3BQ9P1U1 418 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 P2RX2Q9UBL9 471 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 RALYQ9UKM9 306 aaKnown RBP11.95□□□□□ -0.5
VPS33A-202ENST00000451053 PACSIN3Q9UKS6 424 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 PCDHGA10Q9Y5H3 936 aa11.95□□□□□ -0.5
VPS33A-202ENST00000451053 NPIPA5A0A0B4J1W7 369 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 PINLYPA6NC86 204 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 PRAMEF25A6NGN4 478 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 C5orf58C9J3I9 102 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 NPIPA7E9PJI5 369 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 PEX1O43933 1283 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 FCMRO60667 390 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 AK1P00568 194 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 P04436 131 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 CHRM4P08173 479 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 NPIPA8P0DM63 369 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 ARAFP10398 606 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 ATP6V1C1P21283 382 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 PCGF2P35227 344 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 PTGDSP41222 190 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 CASP3P42574 277 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 DNASE1L1P49184 302 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 PSMD4P55036 377 aaKnown RBP11.94□□□□□ -0.5
VPS33A-202ENST00000451053 PMP22Q01453 160 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 MAPK11Q15759 364 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 GRAMD1BQ3KR37 738 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 LCN8Q6JVE9 175 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 PTOV1Q86YD1 416 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 FAM156AQ8NDB6 213 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 RNF138Q8WVD3 245 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 MAL2Q969L2 176 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 TMCO6Q96DC7 493 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 SECISBP2Q96T21 854 aaKnown RBP11.94□□□□□ -0.5
VPS33A-202ENST00000451053 G6PC3Q9BUM1 346 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 ZNF350Q9GZX5 532 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 METTL7AQ9H8H3 244 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 GALNT9Q9HCQ5 603 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 CALML5Q9NZT1 146 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 CNIH4Q9P003 139 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 LIPT1Q9Y234 373 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 ANGPT4Q9Y264 503 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 KLF13Q9Y2Y9 288 aaPredicted RBP11.94□□□□□ -0.5
VPS33A-202ENST00000451053 PCDHGB6Q9Y5F9 930 aa11.94□□□□□ -0.5
VPS33A-202ENST00000451053 C2orf72A6NCS6 295 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 C17orf51A8MQB3 221 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 CXCR6O00574 342 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 ADAM10O14672 748 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 ACOT8O14734 319 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 ARPC2O15144 300 aa11.93□□□□□ -0.5
VPS33A-202ENST00000451053 SCO2O43819 266 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms