RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NR4A3Q92570 626 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 ANAPC16Q96DE5 110 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 PKP4Q99569 1192 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 PIGMQ9H3S5 423 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 LRRN3Q9H3W5 708 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 TMEM30AQ9NV96 361 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 MRPS18AQ9NVS2 196 aaKnown RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 ASB6Q9NWX5 421 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 RASL12Q9NYN1 266 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 DHCR7Q9UBM7 475 aaKnown RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 KCND3Q9UK17 655 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 OARD1Q9Y530 152 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 EVPLQ92817 2033 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 ZSWIM8A7E2V4 1837 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 LCTP09848 1927 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 A0A1W2PRB8 838 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 TRBC2A0A5B9 178 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 POM121BA6NF01 834 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 UPK3BL1B0FP48 263 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 UPK3BL2E5RIL1 263 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 IRAK2O43187 625 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 B4GALT3O60512 393 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 CREBL2O60519 120 aaPredicted RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 PRKRAO75569 313 aaKnown RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 MOCS2O96007 188 aaPredicted RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 ETFAP13804 333 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 INSRRP14616 1297 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 PSMB1P20618 241 aaKnown RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 RAD52P43351 418 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 MTNR1AP48039 350 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 ACTR1AP61163 376 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 MAT1AQ00266 395 aaKnown RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 PDZK1IP1Q13113 114 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 HABP2Q14520 560 aaPredicted RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 SEC23BQ15437 767 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 EIF2S3LQ2VIR3 472 aaKnown RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 DCAF4L1Q3SXM0 396 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 SV2CQ496J9 727 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 KLHL26Q53HC5 615 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 C9orf152Q5JTZ5 239 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 EOGTQ5NDL2 527 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 GLDNQ6ZMI3 551 aaPredicted RBP8.09□□□□□ -1.11
LSM5-208ENST00000450169 GLT6D1Q7Z4J2 308 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 LHFPL3Q86UP9 236 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 ADGRG2Q8IZP9 1017 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 WDSUB1Q8N9V3 476 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 PNPLA2Q96AD5 504 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 DUSP26Q9BV47 211 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 NANSQ9NR45 359 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 TMEM161AQ9NX61 479 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 PPP1R14DQ9NXH3 145 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 DHRS7Q9Y394 339 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 PRKAB1Q9Y478 270 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 DMRT1Q9Y5R6 373 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 PTCH2Q9Y6C5 1203 aa8.09□□□□□ -1.11
LSM5-208ENST00000450169 A0A1B0GV90 55 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 ABHD14A-ACY1A0A1B0GW23 586 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 C5orf58C9J3I9 102 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 FFAR1O14842 300 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 ARPC1BO15143 372 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 PRODHO43272 600 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 HBP1O60381 514 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 ITGA10O75578 1167 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 SC5DO75845 299 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 RGS9O75916 674 aaPredicted RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 IGLV3-25P01717 112 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 HEXAP06865 529 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 GP1BAP07359 652 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 CD63P08962 238 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 RD3LP0DJH9 198 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 SFTPCP11686 197 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 ADCYAP1P18509 176 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 GALP22466 123 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 MAPK3P27361 379 aaPredicted RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 MPGP29372 298 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 MC4RP32245 332 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 SLC1A3P43003 542 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 RIDAP52758 137 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 UBE2IP63279 158 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 MBTPS1Q14703 1052 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 FAM76BQ5HYJ3 339 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 TEX30Q5JUR7 227 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 FAM69AQ5T7M9 428 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 SFXN4Q6P4A7 337 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 MOB3CQ70IA8 216 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 FAM122BQ7Z309 247 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 SPATA2LQ8IUW3 424 aaPredicted RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 UMODL1-AS1Q8N2C9 162 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 FBXO15Q8NCQ5 510 aaPredicted RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 UBTD2Q8WUN7 234 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 THAP4Q8WY91 577 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 RGMAQ96B86 450 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 FUBP3Q96I24 572 aaKnown RBP eCLIP8.08□□□□□ -1.125e-8■■■□□ 17.6
LSM5-208ENST00000450169 POLR1EQ9GZS1 481 aaKnown RBP8.08□□□□□ -1.12
LSM5-208ENST00000450169 MROH8Q9H579 483 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 GOLGA2P5Q9HBQ8 144 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 PTGFRNQ9P2B2 879 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 OPN4Q9UHM6 478 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 CPA4Q9UI42 421 aa8.08□□□□□ -1.12
LSM5-208ENST00000450169 BACE2Q9Y5Z0 518 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms