RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 SPATA5L1Q9BVQ7 753 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 SAP130Q9H0E3 1048 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 REEP4Q9H6H4 257 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 GAREM1Q9H706 876 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 SLC22A14Q9Y267 594 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 PRSS21Q9Y6M0 314 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 TMEM82A0PJX8 343 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 ANKDD1BA6NHY2 528 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 CACNB4O00305 520 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 B3GALT4O96024 378 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 S100A8P05109 93 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 KCNJ10P78508 379 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 DCST1Q5T197 706 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 CMTM8Q8IZV2 173 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 LKAAEAR1Q8TD35 194 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 GLYATL2Q8WU03 294 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 DMRTA2Q96SC8 542 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 ZNF607Q96SK3 696 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 EFCAB11Q9BUY7 163 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 BOCQ9BWV1 1114 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 ANKRD19PQ9H560 264 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 TMEM38AQ9H6F2 299 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 PRMT8Q9NR22 394 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 ENAMQ9NRM1 1142 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 ZNF275Q9NSD4 429 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 CLDN7O95471 211 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 IGHV2-70P01814 119 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 ATP5A1P25705 553 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 AQP1P29972 269 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 TIA1P31483 386 aaKnown RBP eCLIP12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 SLC6A12P48065 614 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 SRP9P49458 86 aaKnown RBP12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 TNFRSF17Q02223 184 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 LGALS3BPQ08380 585 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 TRAM2Q15035 370 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 GSG1Q2KHT4 349 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 FAM74A1Q5RGS3 127 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 ZNF527Q8NB42 609 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 ASB11Q8WXH4 323 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 C8orf33Q9H7E9 229 aaPredicted RBP12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 ENTPD4Q9Y227 616 aa12.64□□□□□ -0.39
SYNGAP1-204ENST00000449372 TRANK1O15050 2925 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 NPIPB15A6NHN6 443 aaPredicted RBP12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 H3BN98 237 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 SULT1C2O00338 296 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 SCAMP1O15126 338 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 CCL16O15467 120 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 LRRTM2O43300 516 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 SDHBP21912 280 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 GIFP27352 417 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 ACSL1P33121 698 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 DGKEP52429 567 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 SNRPGP62308 76 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 RPS25P62851 125 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 FGD2Q7Z6J4 655 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 TMEM25Q86YD3 366 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 OR9Q2Q8NGE9 314 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 SLC35A5Q9BS91 424 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 CPEB1Q9BZB8 566 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 BTBD1Q9H0C5 482 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 CACYBPQ9HB71 228 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 MIEF1Q9NQG6 463 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 DNAJC27Q9NZQ0 273 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 INSL6Q9Y581 213 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 H0YIV9 168 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 FAAHO00519 579 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 PCDH7O60245 1069 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 C1QCP02747 245 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 NFYAP23511 347 aaPredicted RBP12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 TACR1P25103 407 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 AOAHP28039 575 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 PTPN6P29350 595 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 EPHA4P54764 986 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 ZNF763Q0D2J5 394 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 ASPGQ86U10 573 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 AQP11Q8NBQ7 271 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 NDUFAF4Q9P032 175 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 MUC22E2RYF6 1773 aaPredicted RBP12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 EEF1E1O43324 174 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 CPEP16870 476 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 PPP2R1BP30154 601 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 CRTC1Q6UUV9 634 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 USP53Q70EK8 1073 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 RTL10Q7L3V2 364 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 TSPAN33Q86UF1 283 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 THOC6Q86W42 341 aaKnown RBP12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 HSD17B8Q92506 261 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 DPH2Q9BQC3 489 aaPredicted RBP12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 SLC25A19Q9HC21 320 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 SLC13A4Q9UKG4 626 aa12.63□□□□□ -0.39
SYNGAP1-204ENST00000449372 KPNA3O00505 521 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 RP2O75695 350 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 LAMP1P11279 417 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 OSMP13725 252 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 ATP1B2P14415 290 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 ELK1P19419 428 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 AHCYP23526 432 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 VIPR1P32241 457 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 EEF1A1P68104 462 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 PTSQ03393 145 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms