RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 ZCCHC12Q6PEW1 402 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 FIGNL1Q6PIW4 674 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 PSMA8Q8TAA3 256 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 ADAMTS15Q8TE58 950 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 CDS1Q92903 461 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 SLC35G5Q96KT7 338 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 MAGEB18Q96M61 343 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 TBL1XR1Q9BZK7 514 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 TP63Q9H3D4 680 aaPredicted RBP13.28□□□□□ -0.28
USP39-206ENST00000448971 SERHLQ9NQF3 203 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 ZNF446Q9NWS9 450 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 FAM120CQ9NX05 1096 aaKnown RBP13.28□□□□□ -0.28
USP39-206ENST00000448971 FLRT3Q9NZU0 649 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 DKKL1Q9UK85 242 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 ACAD8Q9UKU7 415 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 ABCG2Q9UNQ0 655 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 AKAP6Q13023 2319 aa13.28□□□□□ -0.28
USP39-206ENST00000448971 ACANP16112 2415 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 ADAM10O14672 748 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 UBDO15205 165 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 SUSD5O60279 629 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 ENDOUP21128 410 aaKnown RBP13.27□□□□□ -0.29
USP39-206ENST00000448971 WNT3P56703 355 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 STX1BP61266 288 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 GSTA3Q16772 222 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 PDCD4Q53EL6 469 aaKnown RBP13.27□□□□□ -0.29
USP39-206ENST00000448971 CCNJQ5T5M9 372 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 WLSQ5T9L3 541 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 ZNF585AQ6P3V2 769 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 DOLPP1Q86YN1 238 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 PLCZ1Q86YW0 608 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 OR4K17Q8NGC6 315 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 OR5M9Q8NGP3 310 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 NEIL3Q8TAT5 605 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 CKAP2Q8WWK9 683 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 HOXB13Q92826 284 aaPredicted RBP13.27□□□□□ -0.29
USP39-206ENST00000448971 TEX37Q96LM6 180 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 STACQ99469 402 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 ACTRT3Q9BYD9 372 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 UBQLN3Q9H347 655 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 MCCC2Q9HCC0 563 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 ACKR4Q9NPB9 350 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 TCF7L2Q9NQB0 619 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 DUSP22Q9NRW4 184 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 PNPLA3Q9NST1 481 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 SPRR3Q9UBC9 169 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 GPR45Q9Y5Y3 372 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 DNAJC13O75165 2243 aa13.27□□□□□ -0.29
USP39-206ENST00000448971 A0A1B0GVC2 190 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 PRSS51A0A1B0GVH4 220 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 E9PLN8 166 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 ZNF195O14628 629 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 KCNK2O95069 426 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 UTS2O95399 124 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 IGKV1D-16P01601 117 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 HPNP05981 417 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 PGRP06401 933 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 HPGDP15428 266 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 ATP6V1C1P21283 382 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 MAP3K8P41279 467 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 DGKQP52824 942 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 AQP5P55064 265 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 RPS26P62854 115 aaKnown RBP13.26□□□□□ -0.29
USP39-206ENST00000448971 TLE4Q04727 773 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 GRAMD1BQ3KR37 738 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 EIPR1Q53HC9 387 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 WIPI1Q5MNZ9 446 aaPredicted RBP13.26□□□□□ -0.29
USP39-206ENST00000448971 SWT1Q5T5J6 900 aaKnown RBP13.26□□□□□ -0.29
USP39-206ENST00000448971 OR5M10Q6IEU7 315 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 EPGNQ6UW88 154 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 EML6Q6ZMW3 1958 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 CLEC4FQ8N1N0 589 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 GLB1L3Q8NCI6 653 aaPredicted RBP13.26□□□□□ -0.29
USP39-206ENST00000448971 FAM83FQ8NEG4 500 aaPredicted RBP13.26□□□□□ -0.29
USP39-206ENST00000448971 OR5D16Q8NGK9 328 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 OR14L1PQ8NHC6 308 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 ZNF469Q96JG9 3925 aaPredicted RBP13.26□□□□□ -0.29
USP39-206ENST00000448971 PANX1Q96RD7 426 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 DMRTA2Q96SC8 542 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 VKORC1Q9BQB6 163 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 G6PC3Q9BUM1 346 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 PIGUQ9H490 435 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 SDHAF3Q9NRP4 125 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 GPATCH2Q9NW75 528 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 SLC6A5Q9Y345 797 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 HRH3Q9Y5N1 445 aa13.26□□□□□ -0.29
USP39-206ENST00000448971 PRRC2AP48634 2157 aaKnown RBP13.25□□□□□ -0.29
USP39-206ENST00000448971 C17orf51A8MQB3 221 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 SLC22A3O75751 556 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 CBR3O75828 277 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 TGDSO95455 350 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 TCEA1P23193 301 aaKnown RBP13.25□□□□□ -0.29
USP39-206ENST00000448971 IL12AP29459 219 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 CHI3L1P36222 383 aaPredicted RBP13.25□□□□□ -0.29
USP39-206ENST00000448971 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.25□□□□□ -0.29
USP39-206ENST00000448971 DCST2Q5T1A1 773 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 DNAJC14Q6Y2X3 702 aaPredicted RBP13.25□□□□□ -0.29
USP39-206ENST00000448971 YRDCQ86U90 279 aaKnown RBP13.25□□□□□ -0.29
USP39-206ENST00000448971 CDH24Q86UP0 819 aa13.25□□□□□ -0.29
USP39-206ENST00000448971 IFNEQ86WN2 208 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms