RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 WDSUB1Q8N9V3 476 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 CHDHQ8NE62 594 aaPredicted RBP12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 OR4C3Q8NH37 302 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 ZFP90Q8TF47 636 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 DUSP19Q8WTR2 217 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 RNF138Q8WVD3 245 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 RAB8BQ92930 207 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 NTNG2Q96CW9 530 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 PHF12Q96QT6 1004 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 SDF2Q99470 211 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 FAM107BQ9H098 131 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 RAD21L1Q9H4I0 556 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 ZNF385DQ9H6B1 395 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 PTGES2Q9H7Z7 377 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 TPT1P8Q9HAU6 139 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 ACKR4Q9NPB9 350 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 PLSCR2Q9NRY7 297 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 FBXO34Q9NWN3 711 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 SH3BGRL2Q9UJC5 107 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 LEF1Q9UJU2 399 aaPredicted RBP12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 DKKL1Q9UK85 242 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 NDUFAF1Q9Y375 327 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 PCDHB14Q9Y5E9 798 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 LIPGQ9Y5X9 500 aa12.79□□□□□ -0.36
GTF3C3-206ENST00000448539 NBASA2RRP1 2371 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 NUP214P35658 2090 aaPredicted RBP12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 C15orf38-AP3S2A0A0A6YYH1 394 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 A0A1B0GVC2 190 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 GMNCA6NCL1 334 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 ALG1L2C9J202 215 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 AQP7O14520 342 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 HPNP05981 417 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 SNRPB2P08579 225 aaKnown RBP12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 CAPN3P20807 821 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 LSP1P33241 339 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 ATP12AP54707 1039 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 GAS1P54826 345 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 GPR68Q15743 365 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 GTDC1Q4AE62 458 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 GPAT3Q53EU6 434 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 C1QL3Q5VWW1 255 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 SPATA21Q7Z572 469 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 CPLX4Q7Z7G2 160 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 MISPQ8IVT2 679 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 EID3Q8N140 333 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 FAM26EQ8N5C1 309 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 ZNF614Q8N883 585 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 GATSQ8NAP1 163 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 OR14L1PQ8NHC6 308 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 TSPEARQ8WU66 669 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 SARAFQ96BY9 339 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 ELAC2Q9BQ52 826 aaKnown RBP12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 PAIP1Q9H074 479 aaKnown RBP12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 SLC6A15Q9H2J7 730 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 UBQLN3Q9H347 655 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 SLC6A13Q9NSD5 602 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 THUMPD1Q9NXG2 353 aaKnown RBP12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 FBXL2Q9UKC9 423 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 ACAD8Q9UKU7 415 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 LIPT1Q9Y234 373 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 SLC5A6Q9Y289 635 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 ZNF835Q9Y2P0 537 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 SVILO95425 2214 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 EML6Q6ZMW3 1958 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 EXPH5Q8NEV8 1989 aa12.78□□□□□ -0.36
GTF3C3-206ENST00000448539 NPIPA5A0A0B4J1W7 369 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 A0A1W2PQD3 144 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 CLEC18AA5D8T8 446 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 OR14I1A6ND48 311 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 TMEM247A6NEH6 219 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 NPIPA2E9PIF3 369 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 NPIPA7E9PJI5 369 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 NPIPA3F8WFD2 350 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 CLIC1O00299 241 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 HMGN4O00479 90 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 BCKDKO14874 412 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 LRRTM2O43300 516 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 CCDC22O60826 627 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 NPIPA8P0DM63 369 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 NR2F1P10589 423 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 ESRRAP11474 423 aaPredicted RBP12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 ENDOUP21128 410 aaKnown RBP12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 PPIBP23284 216 aaKnown RBP12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 SRD5A2P31213 254 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 SEC24CP53992 1094 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 DSCR4P56555 118 aaPredicted RBP12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 PER3P56645 1201 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 SRSF1Q07955 248 aaKnown RBP eCLIP12.77□□□□□ -0.372e-7■■□□□ 12.9
GTF3C3-206ENST00000448539 MAPRE2Q15555 327 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 C4orf17Q53FE4 359 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 HEPHL1Q6MZM0 1159 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 CLEC18BQ6UXF7 455 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 Q6ZPB1 254 aaPredicted RBP12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 YRDCQ86U90 279 aaKnown RBP12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 FJX1Q86VR8 437 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 CLEC18CQ8NCF0 446 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 FAM83FQ8NEG4 500 aaPredicted RBP12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 NEIL3Q8TAT5 605 aa12.77□□□□□ -0.37
GTF3C3-206ENST00000448539 FAM57AQ8TBR7 257 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms