RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 FAM26DQ5JW98 314 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 CDC73Q6P1J9 531 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 ZC3H14Q6PJT7 736 aaKnown RBP8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 GLDNQ6ZMI3 551 aaPredicted RBP8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 IZUMO1Q8IYV9 350 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 SVBPQ8N300 66 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 TMEM185AQ8NFB2 350 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 SORCS1Q8WY21 1168 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 RFKQ969G6 155 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 KLRG1Q96E93 195 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 ZNF285Q96NJ3 590 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 OR2A7Q96R45 310 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 FNDC11Q9BVV2 318 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 REEP4Q9H6H4 257 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 NOX3Q9HBY0 568 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 EPHA6Q9UF33 1036 aa8.84□□□□□ -0.99
SYNPO2-204ENST00000448416 TRBV23-1A0A0A0MS06 115 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 A0A0U1RQF3 1178 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 SULT1C2O00338 296 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 ADAM12O43184 909 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 SLC25A27O95847 323 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 SYN1P17600 705 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 CD22P20273 847 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 ADCYAP1R1P41586 468 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 GMFBP60983 142 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 LSM11P83369 360 aaKnown RBP eCLIP8.83□□□□□ -1
SYNPO2-204ENST00000448416 MC1RQ01726 317 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 ACSM1Q08AH1 577 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 MICBQ29980 383 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 CLEC12AQ5QGZ9 265 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 ZNF322Q6U7Q0 402 aaPredicted RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 APOBEC4Q8WW27 367 aaKnown RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 ZNF707Q96C28 371 aaPredicted RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 PPCDCQ96CD2 204 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 MRPL48Q96GC5 212 aaKnown RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 MAGEH1Q9H213 219 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 ISG20L2Q9H9L3 353 aaKnown RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 SGK2Q9HBY8 427 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 GPBP1L1Q9HC44 474 aaPredicted RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 HRASLSQ9HDD0 168 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 PTPRDP23468 1912 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 TO15178 435 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 SNRPBP14678 240 aaKnown RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 RNF144AP50876 292 aaPredicted RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 AVPI1Q5T686 147 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 HES5Q5TA89 166 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 PRAMEF13Q5VWM6 474 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 LIPJQ5W064 366 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 ADNP2Q6IQ32 1131 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 TNFAIP8L2Q6P589 184 aaPredicted RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 ARL9Q6T311 187 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 POGLUT1Q8NBL1 392 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 FCRL4Q96PJ5 515 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 GPA33Q99795 319 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 SMG9Q9H0W8 520 aaKnown RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 DDX31Q9H8H2 851 aaKnown RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 MARCH2Q9P0N8 246 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 PLXNB2O15031 1838 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 PLXNA4Q9HCM2 1894 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 DNAJC25-GNG10A0A024R161 153 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 ITGA10O75578 1167 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 CRYBA1P05813 215 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 ANXA7P20073 488 aaKnown RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 RPS26P62854 115 aaKnown RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 SYTL3Q4VX76 610 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 C10orf120Q5SQS8 335 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 MACC1Q6ZN28 852 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 CEACAM19Q7Z692 300 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 THEM5Q8N1Q8 247 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 OR14A16Q8NHC5 309 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 RGMAQ96B86 450 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 ADAT1Q9BUB4 502 aaKnown RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 TM6SF2Q9BZW4 377 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 CTPS2Q9NRF8 586 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 C14orf105Q9NVL8 296 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 MBD2Q9UBB5 411 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 CAMK2AQ9UQM7 478 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 IRAK3Q9Y616 596 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 TRPM7Q96QT4 1865 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 OR6C68A6NDL8 312 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 TTLL8A6PVC2 850 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 KDM4EB2RXH2 506 aaPredicted RBP8.83□□□□□ -1
SYNPO2-204ENST00000448416 F5H5T6 163 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 GPR37L1O60883 481 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 S100A8P05109 93 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 OR4Q2P0C623 313 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 TACR2P21452 398 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 ACRV1P26436 265 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 TIA1P31483 386 aaKnown RBP eCLIP8.83□□□□□ -1
SYNPO2-204ENST00000448416 SSTP61278 116 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 TMEM255AQ5JRV8 349 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 SLC30A6Q6NXT4 461 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 LINGO2Q7L985 606 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 SLC9B2Q86UD5 537 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 JAZF1Q86VZ6 243 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 TPRA1Q86W33 373 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 CPXM2Q8N436 756 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 OR4D11Q8NGI4 311 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 LPPQ93052 612 aa8.83□□□□□ -1
SYNPO2-204ENST00000448416 WFDC6Q9BQY6 131 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms