RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 HSPH1Q92598 858 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 FAM81BQ96LP2 452 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 OR1F2PQ96R84 312 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 PKP4Q99569 1192 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 SLC30A2Q9BRI3 323 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 ANKHQ9HCJ1 492 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 SLC6A13Q9NSD5 602 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF446Q9NWS9 450 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 CHMP5Q9NZZ3 219 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 PCSK1NQ9UHG2 260 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 AMACRQ9UHK6 382 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 DLGAP4Q9Y2H0 992 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 N6AMT1Q9Y5N5 214 aa4.24□□□□□ -1.73
SDCBP-205ENST00000447267 DNAH10Q8IVF4 4471 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 HEATR5BQ9P2D3 2071 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 A0A0G2JMP0 313 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 A0A0X1KG70 313 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 C1orf226A1L170 272 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 TRIM64CA6NLI5 447 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 SIGLEC16A6NMB1 481 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 AGAP14A8MT82 685 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 BOLA2-SMG1P6H3BVE0 249 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 TXNDC9O14530 226 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 MFSD11O43934 449 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 ERLIN1O75477 346 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 AQP8O94778 261 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 MPZL1O95297 269 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 SMC2O95347 1197 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 YEATS4O95619 227 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 IL32P24001 234 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 CMPK1P30085 196 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 EIF3BP55884 814 aaKnown RBP4.23□□□□□ -1.73
SDCBP-205ENST00000447267 STX17P56962 302 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 LRRC63Q05C16 580 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 TSTA3Q13630 321 aaPredicted RBP4.23□□□□□ -1.73
SDCBP-205ENST00000447267 STK11Q15831 433 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 COBLL1Q53SF7 1204 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 KLF17Q5JT82 389 aaPredicted RBP4.23□□□□□ -1.73
SDCBP-205ENST00000447267 DCAF12L2Q5VW00 463 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF544Q6NX49 715 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 ALKBH5Q6P6C2 394 aaKnown RBP4.23□□□□□ -1.73
SDCBP-205ENST00000447267 PGM2L1Q6PCE3 622 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 SCIMPQ6UWF3 145 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 CHMP1BQ7LBR1 199 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 VN1R4Q7Z5H5 301 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 SATL1Q86VE3 508 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF677Q86XU0 584 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 KRT222Q8N1A0 295 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 TXLNBQ8N3L3 684 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 RPP25LQ8N5L8 163 aaKnown RBP4.23□□□□□ -1.73
SDCBP-205ENST00000447267 TC2NQ8N9U0 490 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 PPHLN1Q8NEY8 458 aaKnown RBP4.23□□□□□ -1.73
SDCBP-205ENST00000447267 OR4M2Q8NGB6 313 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 OR14L1PQ8NHC6 308 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 ELMO1Q92556 727 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 PYCR2Q96C36 320 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 SPACA9Q96E40 222 aaPredicted RBP4.23□□□□□ -1.73
SDCBP-205ENST00000447267 RADILQ96JH8 1075 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 RILPQ96NA2 401 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 DGAT2Q96PD7 388 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 MCEEQ96PE7 176 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 RCHY1Q96PM5 261 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 TSG101Q99816 390 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 FICDQ9BVA6 458 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 PINK1Q9BXM7 581 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 CHIAQ9BZP6 476 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 OR10A4Q9H209 315 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 VPS16Q9H269 839 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 MARCH7Q9H992 704 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 RNF122Q9H9V4 155 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 MRPS30Q9NP92 439 aaKnown RBP4.23□□□□□ -1.73
SDCBP-205ENST00000447267 ABCF3Q9NUQ8 709 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 FAM120CQ9NX05 1096 aaKnown RBP4.23□□□□□ -1.73
SDCBP-205ENST00000447267 CNIH4Q9P003 139 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 SLC17A7Q9P2U7 560 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 KCNG2Q9UJ96 466 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 NUP50Q9UKX7 468 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 ICAM5Q9UMF0 924 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 PPIEQ9UNP9 301 aaKnown RBP4.23□□□□□ -1.73
SDCBP-205ENST00000447267 SNX8Q9Y5X2 465 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 PRSS21Q9Y6M0 314 aa4.23□□□□□ -1.73
SDCBP-205ENST00000447267 SCN3AQ9NY46 2000 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 IGLV3-16A0A075B6K0 115 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 E9PQ18 207 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 PIP5K1BO14986 540 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 PRKRAO75569 313 aaKnown RBP4.22□□□□□ -1.73
SDCBP-205ENST00000447267 GCM2O75603 506 aaPredicted RBP4.22□□□□□ -1.73
SDCBP-205ENST00000447267 NDST3O95803 873 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 TFP02787 698 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 ALOX5P09917 674 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 RALBP11234 206 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 CPEP16870 476 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF708P17019 499 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 IL10P22301 178 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 JAK1P23458 1154 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 PON1P27169 355 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 SLC6A8P48029 635 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF83P51522 516 aa4.22□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF135P52742 658 aaPredicted RBP4.22□□□□□ -1.73
SDCBP-205ENST00000447267 XIAPP98170 497 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms