RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 ELOVL3Q9HB03 270 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SLC17A6Q9P2U8 582 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 LTBP4Q8N2S1 1624 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 RNF212BA8MTL3 300 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 OSMP13725 252 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 MTFR2Q6P444 385 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 RSC1A1Q92681 617 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 BOD1Q96IK1 185 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 KCNA7Q96RP8 456 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 FIZ1Q96SL8 496 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SECISBP2Q96T21 854 aaKnown RBP8.06□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM9BQ9NQ34 198 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF69Q9UC07 566 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CBLCQ9ULV8 474 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CAMK2AQ9UQM7 478 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SDK1Q7Z5N4 2213 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 H7C1Q1 480 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SYT7O43581 403 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 F11P03951 625 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CHMP24386 653 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 LTB4RQ15722 352 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 BCL7AQ4VC05 210 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CPZQ66K79 652 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 LEG1Q6P5S2 330 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 FIGNL1Q6PIW4 674 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CLIP4Q8N3C7 705 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 NPWQ8N729 165 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 GATSQ8NAP1 163 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 RNF128Q8TEB7 428 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 ACSL6Q9UKU0 697 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 MMP17Q9ULZ9 603 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 ASB4Q9Y574 426 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CROCCQ5TZA2 2017 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 TRIM64CA6NLI5 447 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 OR6C76A6NM76 312 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 TARM1B6A8C7 271 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 PITPNBP48739 271 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CTBSQ01459 385 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SLC10A2Q12908 348 aaPredicted RBP8.06□□□□□ -1.12
PTPN3-204ENST00000446349 PDE7AQ13946 482 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 RPE65Q16518 533 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF404Q494X3 552 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SLC36A2Q495M3 483 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 C14orf28Q4W4Y0 310 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SLC35F1Q5T1Q4 408 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM205Q6UW68 189 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 PDSS2Q86YH6 399 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 DNAJC22Q8N4W6 341 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 DEFB123Q8N688 67 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 FAM156AQ8NDB6 213 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 OR52E2Q8NGJ4 325 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CPT1CQ8TCG5 803 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 HTRA1Q92743 480 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SLC39A13Q96H72 371 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 TWSG1Q9GZX9 223 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 INIPQ9NRY2 104 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 ANTXRLA6NF34 631 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 C4orf47A7E2U8 309 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 LCATP04180 440 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 MTNR1AP48039 350 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 PLGLAQ15195 96 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CDKN3Q16667 212 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SLC22A10Q63ZE4 541 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 FAM83HQ6ZRV2 1179 aaPredicted RBP8.06□□□□□ -1.12
PTPN3-204ENST00000446349 PRRC1Q96M27 445 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 FUZQ9BT04 418 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 NUDT9Q9BW91 350 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 TOR3AQ9H497 397 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 NT5DC2Q9H857 520 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM233B4DJY2 109 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 CD79AP11912 226 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 MTHFD2P13995 350 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 IL3RAP26951 378 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 FASLGP48023 281 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM240Q5SV17 173 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 C1orf220Q5T0J3 134 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF648Q5T619 568 aaPredicted RBP8.06□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF610Q8N9Z0 462 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SLC25A43Q8WUT9 341 aaPredicted RBP8.06□□□□□ -1.12
PTPN3-204ENST00000446349 FAM117AQ9C073 453 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 KIR3DX1Q9H7L2 352 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 NIPAL2Q9H841 368 aa8.06□□□□□ -1.12
PTPN3-204ENST00000446349 TMEM184BQ9Y519 407 aaPredicted RBP8.06□□□□□ -1.12
PTPN3-204ENST00000446349 SSC5DA1L4H1 1573 aa8.05□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF850A8MQ14 1090 aa8.05□□□□□ -1.12
PTPN3-204ENST00000446349 MPPED1O15442 326 aa8.05□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF182P17025 639 aaPredicted RBP8.05□□□□□ -1.12
PTPN3-204ENST00000446349 CTHP32929 405 aa8.05□□□□□ -1.12
PTPN3-204ENST00000446349 ART1P52961 327 aa8.05□□□□□ -1.12
PTPN3-204ENST00000446349 SIM1P81133 766 aaPredicted RBP8.05□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF92Q03936 586 aa8.05□□□□□ -1.12
PTPN3-204ENST00000446349 SPERTQ8NA61 448 aa8.05□□□□□ -1.12
PTPN3-204ENST00000446349 STEAP2Q8NFT2 490 aa8.05□□□□□ -1.12
PTPN3-204ENST00000446349 UNKLQ9H9P5 680 aaKnown RBP8.05□□□□□ -1.12
PTPN3-204ENST00000446349 CORINQ9Y5Q5 1042 aa8.05□□□□□ -1.12
PTPN3-204ENST00000446349 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.05□□□□□ -1.12
PTPN3-204ENST00000446349 FAM155AB1AL88 458 aaPredicted RBP8.05□□□□□ -1.12
PTPN3-204ENST00000446349 SELENOWP63302 87 aa8.05□□□□□ -1.12
PTPN3-204ENST00000446349 KCNJ8Q15842 424 aa8.05□□□□□ -1.12
PTPN3-204ENST00000446349 ZNF613Q6PF04 617 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms