RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 SSTR2P30874 369 aa11.13□□□□□ -0.63
MSH6-204ENST00000445503 SRP9P49458 86 aaKnown RBP11.13□□□□□ -0.63
MSH6-204ENST00000445503 FGFBP1Q14512 234 aa11.13□□□□□ -0.63
MSH6-204ENST00000445503 PGGHGQ32M88 737 aa11.13□□□□□ -0.63
MSH6-204ENST00000445503 C11orf88Q6PI97 169 aa11.13□□□□□ -0.63
MSH6-204ENST00000445503 FBXO15Q8NCQ5 510 aaPredicted RBP11.13□□□□□ -0.63
MSH6-204ENST00000445503 SIMC1Q8NDZ2 872 aa11.13□□□□□ -0.63
MSH6-204ENST00000445503 CACNG6Q9BXT2 260 aa11.13□□□□□ -0.63
MSH6-204ENST00000445503 GSDMCQ9BYG8 508 aa11.13□□□□□ -0.63
MSH6-204ENST00000445503 SRMSQ9H3Y6 488 aa11.13□□□□□ -0.63
MSH6-204ENST00000445503 PLEKHB1Q9UF11 243 aaPredicted RBP11.13□□□□□ -0.63
MSH6-204ENST00000445503 VWA8A3KMH1 1905 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 ALPK2Q86TB3 2170 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 UNC119BA6NIH7 251 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 RPP14O95059 124 aaKnown RBP11.12□□□□□ -0.63
MSH6-204ENST00000445503 RASGRP1O95267 797 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 FGF19O95750 216 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 LGI1O95970 557 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 GRPRP30550 384 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 ABATP80404 500 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 PRDX1Q06830 199 aaKnown RBP11.12□□□□□ -0.63
MSH6-204ENST00000445503 HYAL2Q12891 473 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 NNATQ16517 81 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 TMEM44Q2T9K0 475 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 SYT9Q86SS6 491 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 SLC16A11Q8NCK7 471 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 OR7G1Q8NGA0 311 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 TRMT10AQ8TBZ6 339 aaKnown RBP11.12□□□□□ -0.63
MSH6-204ENST00000445503 TRAPPC4Q9Y296 219 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 SLC27A6Q9Y2P4 619 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 A0A1W2PR48 441 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 A8MVJ9 347 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 SLC19A2O60779 497 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 HOXB3P14651 431 aaPredicted RBP11.12□□□□□ -0.63
MSH6-204ENST00000445503 F8A1P23610 371 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 BMP8BP34820 402 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 C21orf58P58505 322 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 SF3A2Q15428 464 aaKnown RBP11.12□□□□□ -0.63
MSH6-204ENST00000445503 FCN2Q15485 313 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 ODF4Q2M2E3 257 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 PRR23CQ6ZRP0 262 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 BMP8AQ7Z5Y6 402 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 ACOT11Q8WXI4 607 aaPredicted RBP11.12□□□□□ -0.63
MSH6-204ENST00000445503 SLC28A3Q9HAS3 691 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 GPR34Q9UPC5 381 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 GPR55Q9Y2T6 319 aaPredicted RBP11.12□□□□□ -0.63
MSH6-204ENST00000445503 A0A1B0GVT2 93 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 MAGEB4O15481 346 aaPredicted RBP11.12□□□□□ -0.63
MSH6-204ENST00000445503 FABP7O15540 132 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 HPGDP15428 266 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 ELK1P19419 428 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 DDX6P26196 483 aaKnown RBP eCLIP11.12□□□□□ -0.63
MSH6-204ENST00000445503 ACTR1BP42025 376 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 SOX9P48436 509 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 ACTR1AP61163 376 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 ANGPT1Q15389 498 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 POMZP3Q6PJE2 187 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 FRRS1Q6ZNA5 592 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 OR52D1Q9H346 318 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 ISG20L2Q9H9L3 353 aaKnown RBP11.12□□□□□ -0.63
MSH6-204ENST00000445503 GNG8Q9UK08 70 aa11.12□□□□□ -0.63
MSH6-204ENST00000445503 TRAV27A0A087WT01 109 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 IFNGP01579 166 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 GIFP27352 417 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 ACADLP28330 430 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 BCL6P41182 706 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 PDX1P52945 283 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 MESP2Q0VG99 397 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 ZNF267Q14586 743 aaPredicted RBP11.11□□□□□ -0.63
MSH6-204ENST00000445503 TP53I3Q53FA7 332 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 ENPP7Q6UWV6 458 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 RPTNQ6XPR3 784 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 SFTPA1Q8IWL2 248 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 SLC44A3Q8N4M1 653 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 MEIOBQ8N635 442 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 OR5W2Q8NH69 310 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 RERGQ96A58 199 aaPredicted RBP11.11□□□□□ -0.63
MSH6-204ENST00000445503 MRGPRX3Q96LB0 322 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 COQ10AQ96MF6 247 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 SLC6A18Q96N87 628 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 LMAN2LQ9H0V9 348 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 ZBP1Q9H171 429 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 OR52A5Q9H2C5 316 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 HINT3Q9NQE9 182 aaKnown RBP11.11□□□□□ -0.63
MSH6-204ENST00000445503 MARK1Q9P0L2 795 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 MED31Q9Y3C7 131 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 SCN3AQ9NY46 2000 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 MN1Q10571 1320 aaPredicted RBP11.11□□□□□ -0.63
MSH6-204ENST00000445503 TEX13CA0A0J9YWL9 993 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 C17orf113A0A1B0GUU1 675 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 P2RY2P41231 377 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 STAT5AP42229 794 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 NLRC5Q86WI3 1866 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 NRROSQ86YC3 692 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 SERPINA12Q8IW75 414 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 CCDC28AQ8IWP9 274 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 OR4M1Q8NGD0 313 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 HMGB4Q8WW32 186 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 TAPBPLQ9BX59 468 aa11.11□□□□□ -0.63
MSH6-204ENST00000445503 ATP13A2Q9NQ11 1180 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms