RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 DUSP5Q16690 384 aa16.6■□□□□ 0.25
SMPD4-210ENST00000441135 C1orf185Q5T7R7 199 aa16.6■□□□□ 0.25
SMPD4-210ENST00000441135 DESI1Q6ICB0 168 aa16.6■□□□□ 0.25
SMPD4-210ENST00000441135 WDR53Q7Z5U6 358 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-210ENST00000441135 CCDC71Q8IV32 467 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-210ENST00000441135 CLECL1Q8IZS7 167 aa16.6■□□□□ 0.25
SMPD4-210ENST00000441135 OR1J4Q8NGS1 313 aa16.6■□□□□ 0.25
SMPD4-210ENST00000441135 MIPOL1Q8TD10 442 aa16.6■□□□□ 0.25
SMPD4-210ENST00000441135 SLC9A6Q92581 669 aa16.6■□□□□ 0.25
SMPD4-210ENST00000441135 BTBD2Q9BX70 525 aa16.6■□□□□ 0.25
SMPD4-210ENST00000441135 KCNJ16Q9NPI9 418 aa16.6■□□□□ 0.25
SMPD4-210ENST00000441135 TMEM45AQ9NWC5 275 aa16.6■□□□□ 0.25
SMPD4-210ENST00000441135 FAF1Q9UNN5 650 aaPredicted RBP16.6■□□□□ 0.25
SMPD4-210ENST00000441135 ADGRG4Q8IZF6 3080 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 GXYLT2A0PJZ3 443 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 FAM90A27PA6NNH2 459 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 FADS1O60427 444 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 SLC22A3O75751 556 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 KCNK2O95069 426 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 UQCRC2P22695 453 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 IL12AP29459 219 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 IDH3AP50213 366 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 GAS1P54826 345 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 TXNL4AP83876 142 aaKnown RBP16.59■□□□□ 0.25
SMPD4-210ENST00000441135 TP53BP2Q13625 1128 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 RTL6Q6ICC9 239 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 ANGPTL8Q6UXH0 198 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 MEX3BQ6ZN04 569 aaKnown RBP16.59■□□□□ 0.25
SMPD4-210ENST00000441135 COX18Q8N8Q8 333 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 OR4A15Q8NGL6 344 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 C14orf79Q96F83 325 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 RMND5BQ96G75 393 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-210ENST00000441135 C16orf58Q96GQ5 468 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 TREX2Q9BQ50 279 aaPredicted RBP16.59■□□□□ 0.25
SMPD4-210ENST00000441135 G6PC3Q9BUM1 346 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 FBN2P35556 2912 aa16.59■□□□□ 0.25
SMPD4-210ENST00000441135 C15orf38-AP3S2A0A0A6YYH1 394 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 RNF103-CHMP3A0A140T963 221 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 DUXAA6NLW8 204 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 EDF1O60869 148 aaKnown RBP16.58■□□□□ 0.24
SMPD4-210ENST00000441135 CBR3O75828 277 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 TRAPPC6AO75865 159 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 AK1P00568 194 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 SOAT1P35610 550 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 TRPC1P48995 793 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 CLK3P49761 638 aaKnown RBP16.58■□□□□ 0.24
SMPD4-210ENST00000441135 AQP5P55064 265 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 POU6F2P78424 691 aaPredicted RBP16.58■□□□□ 0.24
SMPD4-210ENST00000441135 PLCZ1Q86YW0 608 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 ZNF295-AS1Q8N0V1 137 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 MIER2Q8N344 545 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 OR10Q1Q8NGQ4 319 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 ADAMTS15Q8TE58 950 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 PIK3R3Q92569 461 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 JADE3Q92613 823 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 GALNT9Q9HCQ5 603 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 SDHAF3Q9NRP4 125 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 ALKBH4Q9NXW9 302 aa16.58■□□□□ 0.24
SMPD4-210ENST00000441135 MRPS18CQ9Y3D5 142 aaKnown RBP16.58■□□□□ 0.24
SMPD4-210ENST00000441135 NKX2-6A6NCS4 301 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 TOXO94900 526 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 UTS2O95399 124 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 AGR2O95994 175 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 IGKV1D-16P01601 117 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 IGFBP2P18065 325 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 MAGEA8P43361 318 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 ZFP36L2P47974 494 aaKnown RBP16.57■□□□□ 0.24
SMPD4-210ENST00000441135 ATP4BP51164 291 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 STX1BP61266 288 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 TFF3Q07654 80 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 NHSL2Q5HYW2 709 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 RIPPLY2Q5TAB7 128 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 C6orf120Q7Z4R8 191 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 ANKRD46Q86W74 232 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 ULK2Q8IYT8 1036 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 TRIML2Q8N7C3 387 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 WDSUB1Q8N9V3 476 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 NEURL3Q96EH8 262 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 GNRHR2Q96P88 292 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 OR52E6Q96RD3 313 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 OR2B2Q9GZK3 357 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 CCDC134Q9H6E4 229 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 NPDC1Q9NQX5 325 aaPredicted RBP16.57■□□□□ 0.24
SMPD4-210ENST00000441135 NCKAP5O14513 1909 aa16.57■□□□□ 0.24
SMPD4-210ENST00000441135 IGLV3-32A0A0A0MS00 114 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 FAM234BA2RU67 622 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 AHRRA9YTQ3 701 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 ALG1L2C9J202 215 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 GNB5O14775 395 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 GUSBP08236 651 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 MSX1P28360 303 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 SRD5A2P31213 254 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 GCKP35557 465 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 NME5P56597 212 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 CRYZQ08257 329 aaKnown RBP16.56■□□□□ 0.24
SMPD4-210ENST00000441135 TOMM20Q15388 145 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 SF3B4Q15427 424 aaKnown RBP eCLIP16.56■□□□□ 0.244e-9■■■■■ 28.4
SMPD4-210ENST00000441135 SAXO2Q658L1 398 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 PM20D2Q8IYS1 436 aa16.56■□□□□ 0.24
SMPD4-210ENST00000441135 FADS6Q8N9I5 356 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms