RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PDCD2Q16342 344 aaPredicted RBP17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 IL23RQ5VWK5 629 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 FBXW10Q5XX13 1052 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 MFSD12Q6NUT3 480 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 FIGNL1Q6PIW4 674 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 EXOC3L1Q86VI1 746 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 GCNT2Q8N0V5 402 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 WNT2BQ93097 391 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 INTS12Q96CB8 462 aaKnown RBP17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 OTUB1Q96FW1 271 aaPredicted RBP17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 PPP1R36Q96LQ0 422 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 SH3GL2Q99962 352 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 SFXN3Q9BWM7 321 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 ATP6V1HQ9UI12 483 aa17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 NUP214P35658 2090 aaPredicted RBP17.98■□□□□ 0.47
SHROOM1-204ENST00000440118 CFLARO15519 480 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 NDUFB5O43674 189 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 ZIC3O60481 467 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 NKX2-2O95096 273 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 IL18BPO95998 194 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 SERPINE1P05121 402 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 ACP2P11117 423 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 ARRB2P32121 409 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 FRKP42685 505 aaPredicted RBP17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 ETV4P43268 484 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 TP53BP2Q13625 1128 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 FLYWCH1Q4VC44 716 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 C6orf136Q5SQH8 315 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 ZCCHC12Q6PEW1 402 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 PLXDC2Q6UX71 529 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 NATD1Q8N6N6 113 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 GATSQ8NAP1 163 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 OR5M1Q8NGP8 315 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 OR6Y1Q8NGX8 325 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 GOT1L1Q8NHS2 421 aaPredicted RBP17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 ZBTB9Q96C00 473 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 FAM120BQ96EK7 910 aaKnown RBP17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 C1GALT1C1Q96EU7 318 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 C3orf30Q96M34 536 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 PIGQQ9BRB3 760 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 KCNK9Q9NPC2 374 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 DNAJB12Q9NXW2 375 aaKnown RBP17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 CRIM1Q9NZV1 1036 aa17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 FAF1Q9UNN5 650 aaPredicted RBP17.97■□□□□ 0.47
SHROOM1-204ENST00000440118 MPDZO75970 2070 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 UQCRHLA0A096LP55 91 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 TUBAL3A6NHL2 446 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 SLC22A20A6NK97 555 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 LINC01387J3KSC0 135 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 SCDO00767 359 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 TM9SF1O15321 606 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 IGKV1D-16P01601 117 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 LAMP1P11279 417 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 PRPS1L1P21108 318 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 ATP6V1C1P21283 382 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 SOAT1P35610 550 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 LASP1Q14847 261 aaKnown RBP17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 DUSP5Q16690 384 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 LSM12Q3MHD2 195 aaKnown RBP17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 FBXL19-AS1Q494R0 122 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 PPP4R4Q6NUP7 873 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 CROCCP2Q86T23 111 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 LUZP2Q86TE4 346 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 SLC16A11Q8NCK7 471 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 OR56A1Q8NGH5 318 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 C16orf58Q96GQ5 468 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 PAIP2Q9BPZ3 127 aaKnown RBP17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 G6PC3Q9BUM1 346 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 POLDIP3Q9BY77 421 aaKnown RBP17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 NEUROD4Q9HD90 331 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 NOP53Q9NZM5 478 aaKnown RBP17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 CLCF1Q9UBD9 225 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 STOML1Q9UBI4 398 aa17.96■□□□□ 0.47
SHROOM1-204ENST00000440118 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 BIRC5O15392 142 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 KCNK2O95069 426 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 RCBTB2O95199 551 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 OXSR1O95747 527 aaPredicted RBP17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 TUBBP07437 444 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 KRT16P08779 473 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 CPOXP36551 454 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 DIO3P55073 304 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 B3GALT5-AS1P59052 145 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 ABCE1P61221 599 aaKnown RBP17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 POU6F2P78424 691 aaPredicted RBP17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 FOXF2Q12947 444 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 MLC1Q15049 377 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 BCL2A1Q16548 175 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 OR2A2Q6IF42 318 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 KRTCAP2Q8N6L1 136 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 CNEP1R1Q8N9A8 125 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 FAM222BQ8WU58 562 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 OR5P2Q8WZ92 322 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 GIMAP5Q96F15 307 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 RBM24Q9BX46 236 aaKnown RBP17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 RTN4RQ9BZR6 473 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 SSU72Q9NP77 194 aaKnown RBP17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 NTMQ9P121 344 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 VDAC3Q9Y277 283 aa17.95■□□□□ 0.46
SHROOM1-204ENST00000440118 AKAP6Q13023 2319 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms