RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 DCAF12Q5T6F0 453 aa18.19■□□□□ 0.5
APTR-204ENST00000440088 ZSCAN1Q8NBB4 408 aa18.19■□□□□ 0.5
APTR-204ENST00000440088 PRSS33Q8NF86 280 aa18.19■□□□□ 0.5
APTR-204ENST00000440088 LCORQ96JN0 433 aaPredicted RBP18.19■□□□□ 0.5
APTR-204ENST00000440088 WDR54Q9H977 334 aa18.19■□□□□ 0.5
APTR-204ENST00000440088 AKIRIN1Q9H9L7 192 aaPredicted RBP18.19■□□□□ 0.5
APTR-204ENST00000440088 PARD6AQ9NPB6 346 aa18.19■□□□□ 0.5
APTR-204ENST00000440088 PNPLA3Q9NST1 481 aa18.19■□□□□ 0.5
APTR-204ENST00000440088 GPN3Q9UHW5 284 aaPredicted RBP18.19■□□□□ 0.5
APTR-204ENST00000440088 CDHR4A6H8M9 788 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 FRG2CA6NGY1 282 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 OR6C76A6NM76 312 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 DRD5P21918 477 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 TAS2R41P59536 307 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 EBPQ15125 230 aaKnown RBP18.18■□□□□ 0.5
APTR-204ENST00000440088 ISXQ2M1V0 245 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 PDZK1Q5T2W1 519 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 HLA-DQA1Q5Y7H0 255 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 SLC29A4Q7RTT9 530 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 TSPYL5Q86VY4 417 aaPredicted RBP18.18■□□□□ 0.5
APTR-204ENST00000440088 OFCC1Q8IZS5 231 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 OR9Q2Q8NGE9 314 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 ADIPOR1Q96A54 375 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 GAL3ST4Q96RP7 486 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 CRB3Q9BUF7 120 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 NXF5Q9H1B4 397 aaKnown RBP18.18■□□□□ 0.5
APTR-204ENST00000440088 ZNF556Q9HAH1 456 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 SCOCQ9UIL1 159 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 PCDHGA1Q9Y5H4 931 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 LOC100130705A0A1B0GUX0 176 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 FAAHO00519 579 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 TPST2O60704 377 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 TNFAIP8O95379 198 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 OXSR1O95747 527 aaPredicted RBP18.18■□□□□ 0.5
APTR-204ENST00000440088 ITGAMP11215 1152 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 PSMD4P55036 377 aaKnown RBP18.18■□□□□ 0.5
APTR-204ENST00000440088 RAB11FIP2Q7L804 512 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 C9orf40Q8IXQ3 194 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 ZNF614Q8N883 585 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 SLC7A13Q8TCU3 470 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 MR1Q95460 341 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 MUS81Q96NY9 551 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 RIBC2Q9H4K1 309 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 CTPS2Q9NRF8 586 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 B3GALT1Q9Y5Z6 326 aa18.18■□□□□ 0.5
APTR-204ENST00000440088 WDFY3Q8IZQ1 3526 aa18.17■□□□□ 0.5
APTR-204ENST00000440088 IGHV3-20A0A0C4DH32 117 aa18.17■□□□□ 0.5
APTR-204ENST00000440088 SLC16A6O15403 523 aa18.17■□□□□ 0.5
APTR-204ENST00000440088 ATP12AP54707 1039 aa18.17■□□□□ 0.5
APTR-204ENST00000440088 MYBPC1Q00872 1141 aa18.17■□□□□ 0.5
APTR-204ENST00000440088 ZNF141Q15928 474 aa18.17■□□□□ 0.5
APTR-204ENST00000440088 CDCP2Q5VXM1 449 aa18.17■□□□□ 0.5
APTR-204ENST00000440088 FAM199XQ6PEV8 388 aaPredicted RBP18.17■□□□□ 0.5
APTR-204ENST00000440088 RANBP3LQ86VV4 465 aaPredicted RBP18.17■□□□□ 0.5
APTR-204ENST00000440088 LIN37Q96GY3 246 aaPredicted RBP18.17■□□□□ 0.5
APTR-204ENST00000440088 MCHR1Q99705 422 aa18.17■□□□□ 0.5
APTR-204ENST00000440088 EVA1AQ9H8M9 152 aa18.17■□□□□ 0.5
APTR-204ENST00000440088 PAPOLBQ9NRJ5 636 aaKnown RBP18.17■□□□□ 0.5
APTR-204ENST00000440088 MRTO4Q9UKD2 239 aaKnown RBP18.17■□□□□ 0.5
APTR-204ENST00000440088 POFUT2Q9Y2G5 429 aa18.17■□□□□ 0.5
APTR-204ENST00000440088 SAGE2PA6NJ88 616 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 CPSF4LA6NMK7 179 aaKnown RBP18.16■□□□□ 0.5
APTR-204ENST00000440088 C9J4A7 227 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 NPIPB9F8W1W9 429 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 UGT2B11O75310 529 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 POLR2IP36954 125 aaKnown RBP18.16■□□□□ 0.5
APTR-204ENST00000440088 GPR143P51810 404 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 HOXC5Q00444 222 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 ST3GAL3Q11203 375 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 BLMHQ13867 455 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 ENTPD8Q5MY95 495 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 ZNF517Q6ZMY9 492 aaPredicted RBP18.16■□□□□ 0.5
APTR-204ENST00000440088 PLEKHM3Q6ZWE6 761 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 B3GNT7Q8NFL0 401 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 ADAMTS16Q8TE57 1224 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 DIO2Q92813 273 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 ZPBPQ9BS86 351 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 PRR14Q9BWN1 585 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 WWTR1Q9GZV5 400 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 MAN2C1Q9NTJ4 1040 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 C19orf25Q9UFG5 118 aaPredicted RBP18.16■□□□□ 0.5
APTR-204ENST00000440088 PRKNO60260 465 aaPredicted RBP18.16■□□□□ 0.5
APTR-204ENST00000440088 ETV5P41161 510 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 ZNF136P52737 540 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 SEC23BQ15437 767 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 ZSWIM7Q19AV6 140 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 ZNF770Q6IQ21 691 aaPredicted RBP18.16■□□□□ 0.5
APTR-204ENST00000440088 TMEM154Q6P9G4 183 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 C8orf59Q8N0T1 100 aaPredicted RBP18.16■□□□□ 0.5
APTR-204ENST00000440088 AQP11Q8NBQ7 271 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 EFHD2Q96C19 240 aaPredicted RBP18.16■□□□□ 0.5
APTR-204ENST00000440088 LMF1Q96S06 567 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 NIPSNAP1Q9BPW8 284 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 FUZQ9BT04 418 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 COL25A1Q9BXS0 654 aaPredicted RBP18.16■□□□□ 0.5
APTR-204ENST00000440088 GRIP2Q9C0E4 1043 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.16■□□□□ 0.5
APTR-204ENST00000440088 TOR4AQ9NXH8 423 aa18.16■□□□□ 0.5
APTR-204ENST00000440088 SH3PXD2BA1X283 911 aa18.15■□□□□ 0.5
APTR-204ENST00000440088 PCNX2A6NKB5 2137 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms