RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TRIML2Q8N7C3 387 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 ZNF527Q8NB42 609 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 GLB1L3Q8NCI6 653 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-216ENST00000439475 OR2M3Q8NG83 312 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 OR4A15Q8NGL6 344 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 GOT1L1Q8NHS2 421 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-216ENST00000439475 FAM110BQ8TC76 370 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 ZPLD1Q8TCW7 415 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 WDYHV1Q96HA8 205 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 CXorf36Q9H7Y0 433 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 EXD2Q9NVH0 621 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 MED11Q9P086 117 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 MARCOQ9UEW3 520 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-216ENST00000439475 FBXL2Q9UKC9 423 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 UBR5O95071 2799 aaPredicted RBP9.52□□□□□ -0.89
MCF2L-216ENST00000439475 GOLGA8QA0A0J9YX86 632 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 RNF103-CHMP3A0A140T963 221 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 A0A1W2PQD3 144 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 GOLGA8OA6NCC3 632 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 CD8B2A6NJW9 211 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 ALG1L2C9J202 215 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 E9PBE3 544 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 GOLGA8NF8WBI6 632 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 OXSR1O95747 527 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-216ENST00000439475 AK1P00568 194 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 NGFRP08138 427 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 IDO1P14902 403 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 UQCRC2P22695 453 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 EPHA3P29320 983 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 ANXA11P50995 505 aaKnown RBP9.51□□□□□ -0.89
MCF2L-216ENST00000439475 EEF1A1P68104 462 aaKnown RBP9.51□□□□□ -0.89
MCF2L-216ENST00000439475 BCL2A1Q16548 175 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 GSTA3Q16772 222 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 GRAMD1BQ3KR37 738 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 GLYR1Q49A26 553 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-216ENST00000439475 ATAD3BQ5T9A4 648 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 EEF1A1P5Q5VTE0 462 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 RTL6Q6ICC9 239 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 MTERF4Q7Z6M4 381 aaKnown RBP9.51□□□□□ -0.89
MCF2L-216ENST00000439475 CCDC71Q8IV32 467 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-216ENST00000439475 RPRMLQ8N4K4 120 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 MARVELD2Q8N4S9 558 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 MEIOBQ8N635 442 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 FADS6Q8N9I5 356 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 FBXO30Q8TB52 745 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 ACTRT2Q8TDY3 377 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 CDS1Q92903 461 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 MARVELD3Q96A59 401 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 SLC35G5Q96KT7 338 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 OR7D2Q96RA2 312 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 TRIB1Q96RU8 372 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 PIGQQ9BRB3 760 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 WDR55Q9H6Y2 383 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-216ENST00000439475 CALHM2Q9HA72 323 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 SLC24A3Q9HC58 644 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 INTS9Q9NV88 658 aaKnown RBP9.51□□□□□ -0.89
MCF2L-216ENST00000439475 AIG1Q9NVV5 245 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 GPATCH2Q9NW75 528 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 RPH3AQ9Y2J0 694 aaPredicted RBP9.51□□□□□ -0.89
MCF2L-216ENST00000439475 FAM215AQ9Y5M1 114 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 ARHGAP21Q5T5U3 1957 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 CACNA1DQ01668 2161 aa9.51□□□□□ -0.89
MCF2L-216ENST00000439475 SPTBN1Q01082 2364 aaKnown RBP9.51□□□□□ -0.89
MCF2L-216ENST00000439475 A0A087WZY1 265 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 FAM90A27PA6NNH2 459 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 H0Y3Z8 333 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 DVL2O14641 736 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 UBDO15205 165 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 ZIC3O60481 467 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 DIAPH2O60879 1101 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 TGDSO95455 350 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 IGKV1D-16P01601 117 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 IL6P05231 212 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 H2AFXP16104 143 aaPredicted RBP9.5□□□□□ -0.89
MCF2L-216ENST00000439475 GRNP28799 593 aaKnown RBP9.5□□□□□ -0.89
MCF2L-216ENST00000439475 CHI3L1P36222 383 aaPredicted RBP9.5□□□□□ -0.89
MCF2L-216ENST00000439475 ATP12AP54707 1039 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 GFRA1P56159 465 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 WNT3P56703 355 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 RPS3AP61247 264 aaKnown RBP9.5□□□□□ -0.89
MCF2L-216ENST00000439475 UFM1P61960 85 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 PPP2R2AP63151 447 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 TXNL4AP83876 142 aaKnown RBP9.5□□□□□ -0.89
MCF2L-216ENST00000439475 SRYQ05066 204 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 SLC25A35Q3KQZ1 300 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 FAM174BQ3ZCQ3 159 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 ACSF3Q4G176 576 aaPredicted RBP9.5□□□□□ -0.89
MCF2L-216ENST00000439475 PDCD4Q53EL6 469 aaKnown RBP9.5□□□□□ -0.89
MCF2L-216ENST00000439475 SPANXN4Q5MJ08 99 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 EXOSC6Q5RKV6 272 aaKnown RBP9.5□□□□□ -0.89
MCF2L-216ENST00000439475 RAET1LQ5VY80 246 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 NSUN5P2Q63ZY6 315 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 CLECL1Q8IZS7 167 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 OR4C3Q8NH37 302 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 OR5AK3PQ8NH89 298 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 NUDT8Q8WV74 236 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 MAELQ96JY0 434 aaKnown RBP9.5□□□□□ -0.89
MCF2L-216ENST00000439475 C7orf26Q96N11 449 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 OR52E6Q96RD3 313 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 PANX1Q96RD7 426 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms