RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 P2RY14Q15391 338 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 C6orf132Q5T0Z8 1188 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 MZT2BQ6NZ67 158 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 ZNF620Q6ZNG0 422 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 VASH1Q7L8A9 365 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 RRM2BQ7LG56 351 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 CACUL1Q86Y37 369 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 LIX1LQ8IVB5 337 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 NKAIN4Q8IVV8 208 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 TRIM48Q8IWZ4 208 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 C19orf18Q8NEA5 215 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 NLGN4YQ8NFZ3 816 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 OR9A2Q8NGT5 310 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 NEIL3Q8TAT5 605 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 DNAJA4Q8WW22 397 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 ELP4Q96EB1 424 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 SENP5Q96HI0 755 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 TEX12Q9BXU0 123 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 RNF32Q9H0A6 362 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 GIMAP4Q9NUV9 329 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 KLHL21Q9UJP4 597 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 NUMA1Q14980 2115 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 NCR1O76036 304 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 THY1P04216 161 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 PRKAR1AP10644 381 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 ALAS2P22557 587 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 DRD3P35462 400 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 TNFRSF4P43489 277 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 KIR2DL1P43626 348 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 GPR4P46093 362 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 AVPR1BP47901 424 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 ENPP2Q13822 863 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 TATDN3Q17R31 274 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 ZNF791Q3KP31 576 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 Q5BKY6 102 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 EOGTQ5NDL2 527 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 TIGD3Q6B0B8 471 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 MZT2AQ6P582 158 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 PLEKHM3Q6ZWE6 761 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 TMEM145Q8NBT3 493 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 BBS1Q8NFJ9 593 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 SPRYD4Q8WW59 207 aaPredicted RBP15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 GIMAP5Q96F15 307 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 ZNF681Q96N22 645 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 TMEM43Q9BTV4 400 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 HDHD5Q9BXW7 423 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 BEX2Q9BXY8 128 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 OSGEPL1Q9H4B0 414 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 TBC1D17Q9HA65 648 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 EQTNQ9NQ60 294 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 MBNL1Q9NR56 388 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 IMP3Q9NV31 184 aaKnown RBP15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 MALT1Q9UDY8 824 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 NTNG1Q9Y2I2 539 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 OR1A2Q9Y585 309 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 CDH10Q9Y6N8 788 aa15.31■□□□□ 0.04
CLCNKA-203ENST00000439316 SGK494L7N484 410 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 LYRM1O43325 122 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 MBTPS2O43462 519 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 PRICKLE3O43900 615 aaPredicted RBP15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 OR5F1O95221 314 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 CELP19835 753 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 GALP22466 123 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 RGS8P57771 180 aaPredicted RBP15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 FZD5Q13467 585 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 C2orf27AQ580R0 203 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 MBOAT2Q6ZWT7 520 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 C16orf62Q7Z3J2 963 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 GDF7Q7Z4P5 450 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 NRMQ8IXM6 262 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 PEX5LQ8IYB4 626 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 KCNJ15Q99712 375 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 SARGQ9BW04 601 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 NDEL1Q9GZM8 345 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 WDR26Q9H7D7 661 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 UBE2ZQ9H832 354 aaPredicted RBP15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 WDR70Q9NW82 654 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 KLHL28Q9NXS3 571 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 CBLCQ9ULV8 474 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 ALG5Q9Y673 324 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 TRPM6Q9BX84 2022 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 DOCK9Q9BZ29 2069 aa15.3■□□□□ 0.04
CLCNKA-203ENST00000439316 FAM25AB3EWG3 89 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 FAM25CB3EWG5 89 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 FAM25GB3EWG6 89 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 J3QRE1 110 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 PIP5K1CO60331 668 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 MPIP34949 423 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 TSFMP43897 325 aaKnown RBP15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 CLDN20P56880 219 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 ABATP80404 500 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 IL18Q14116 193 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 HEPHL1Q6MZM0 1159 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 ZNF322Q6U7Q0 402 aaPredicted RBP15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 TRILQ7L0X0 811 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 ABI3BPQ7Z7G0 1075 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 GLCCI1Q86VQ1 547 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 SLC44A3Q8N4M1 653 aa15.29■□□□□ 0.04
CLCNKA-203ENST00000439316 SLC41A3Q96GZ6 507 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms