RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 GIMAP4Q9NUV9 329 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 MKLN1Q9UL63 735 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 GPR55Q9Y2T6 319 aaPredicted RBP12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 ZNF780BQ9Y6R6 833 aa12.96□□□□□ -0.33
PTCHD3-201ENST00000438700 K7ESF4 209 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 P2RX6O15547 441 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 SLC35G6P0C7Q6 338 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 RPS19P39019 145 aaKnown RBP12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 ANXA11P50995 505 aaKnown RBP12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 DAB2P98082 770 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 DMWDQ09019 674 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 ELOCQ15369 112 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 ZNF311Q5JNZ3 666 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 PAQR6Q6TCH4 344 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 ZNF438Q7Z4V0 828 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 OR4N5Q8IXE1 308 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 CADM2Q8N3J6 435 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 OR8J1Q8NGP2 316 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 PRRC1Q96M27 445 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 SNX18Q96RF0 628 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 PHOX2BQ99453 314 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 CNPPD1Q9BV87 410 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 EXOSC4Q9NPD3 245 aaKnown RBP12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 NUFIP1Q9UHK0 495 aaKnown RBP12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 A3GALT2U3KPV4 340 aa12.96□□□□□ -0.34
PTCHD3-201ENST00000438700 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 CPSF4LA6NMK7 179 aaKnown RBP12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 WWP2O00308 870 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 EMC8O43402 210 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 APOL3O95236 402 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 NR2F6P10588 404 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 PTNP21246 168 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 AVPR1BP47901 424 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 TAS2R41P59536 307 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 ARPC4P59998 168 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 DEFB134Q4QY38 66 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 C6orf132Q5T0Z8 1188 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 FAM111BQ6SJ93 734 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 ATCAYQ86WG3 371 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 LAX1Q8IWV1 398 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 SHISA5Q8N114 240 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 MORN4Q8NDC4 146 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 NT5CQ8TCD5 201 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 KLHL6Q8WZ60 621 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 GAL3ST3Q96A11 431 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 TRMT61AQ96FX7 289 aaKnown RBP12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 ZNF681Q96N22 645 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 OPALINQ96PE5 141 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 TSSK6Q9BXA6 273 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 PLA2G12AQ9BZM1 189 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 SLC38A1Q9H2H9 487 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 EGLN3Q9H6Z9 239 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 NDOR1Q9UHB4 597 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 PILRAQ9UKJ1 303 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 MAU2Q9Y6X3 613 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 TP53BP1Q12888 1972 aaPredicted RBP12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 MYO15AQ9UKN7 3530 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 LOC105369274A0A096LPK9 316 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 LOC102723532A0A0G2JNH3 316 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 A0A0G2JPF8 293 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 A0A0J9YY10 115 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 MEIOCA2RUB1 952 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 OR5K3A6NET4 321 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 CENPBD1B2RD01 187 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 HNRNPCL2B2RXH8 293 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 HNRNPCL3B7ZW38 293 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 ERVH48-1M5A8F1 160 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 FCMRO60667 390 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 DNAJB6O75190 326 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 HNRNPCL4P0DMR1 293 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 ARFIP1P53367 373 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 TGM3Q08188 693 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 GNA13Q14344 377 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 GINS1Q14691 196 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 ZNF79Q15937 498 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 ACSM5Q6NUN0 579 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 RFPL4BQ6ZWI9 263 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 C16orf62Q7Z3J2 963 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 OOSP2Q86WS3 158 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 OR4N4Q8N0Y3 316 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 C1orf216Q8TAB5 229 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 BAHD1Q8TBE0 780 aaPredicted RBP12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 C3orf14Q9HBI5 128 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 CNIH4Q9P003 139 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 NTNG1Q9Y2I2 539 aa12.95□□□□□ -0.34
PTCHD3-201ENST00000438700 CACNA1IQ9P0X4 2223 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 ZNF860A6NHJ4 632 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 CSO75390 466 aaKnown RBP12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 ZIC2O95409 532 aaPredicted RBP12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 PIPP12273 146 aaPredicted RBP12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 TSFMP43897 325 aaKnown RBP12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 CSNK1EP49674 416 aaKnown RBP12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 SIM1P81133 766 aaPredicted RBP12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 SLC16A11Q8NCK7 471 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 OR7G2Q8NG99 324 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 MAFAQ8NHW3 353 aaPredicted RBP12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 ASB15Q8WXK1 588 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 TM4SF19Q96DZ7 209 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 LRR1Q96L50 414 aa12.94□□□□□ -0.34
PTCHD3-201ENST00000438700 ZFYVE21Q9BQ24 234 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms