RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 RAD51Q06609 339 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 TSPAN31Q12999 210 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 PKP1Q13835 747 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SERTAD2Q14140 314 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 TMEM132DQ14C87 1099 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 EXOSC7Q15024 291 aaKnown RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 TRAM2Q15035 370 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 PDK2Q15119 407 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 C5orf64Q2M2E5 130 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SFT2D3Q587I9 215 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SYT14P1Q58G82 188 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 KHDRBS2Q5VWX1 349 aaKnown RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLX4IPQ5VYV7 408 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 BSPRYQ5W0U4 402 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 HIST2H2AA3Q6FI13 130 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CTRB2Q6GPI1 263 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR5M10Q6IEU7 315 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 FAM71F2Q6NXP2 309 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CD300LGQ6UXG3 332 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF66Q6ZN08 573 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CPEB2Q7Z5Q1 589 aaKnown RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZFAND4Q86XD8 727 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 GPSM1Q86YR5 675 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC13A5Q86YT5 568 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CLEC4FQ8N1N0 589 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 MARVELD2Q8N4S9 558 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 FAM89BQ8N5H3 189 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CCDC185Q8N715 623 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 HORMAD2Q8N7B1 307 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 C8orf31Q8N9H6 132 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 LRRC75AQ8NAA5 344 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC38A9Q8NBW4 561 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 C19orf18Q8NEA5 215 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 DDHD1Q8NEL9 900 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR5D18Q8NGL1 313 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR5M8Q8NGP6 311 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 OR1L6Q8NGR2 347 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SSMEM1Q8WWF3 244 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 TCP11Q8WWU5 503 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SORCS1Q8WY21 1168 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SMPDL3AQ92484 453 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 NAT6Q93015 286 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 MTBPQ96DY7 904 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 B3GALT6Q96L58 329 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CXorf58Q96LI9 332 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CEP19Q96LK0 163 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ZNF578Q96N58 590 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 TAAR1Q96RJ0 339 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 COPS8Q99627 209 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 NAPGQ99747 312 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 P2RY13Q9BPV8 354 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 TTYH2Q9BSA4 534 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SYT11Q9BT88 431 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 NDUFAF3Q9BU61 184 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 CCDC28BQ9BUN5 200 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 FUNDC2Q9BWH2 189 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ERVK-6Q9BXR3 956 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACTRT3Q9BYD9 372 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 LRRC2Q9BYS8 371 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 MIS12Q9H081 205 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 UPF3AQ9H1J1 476 aaKnown RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 LRRN3Q9H3W5 708 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 NXF3Q9H4D5 531 aaKnown RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 FAM124BQ9H5Z6 455 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 KAT8Q9H7Z6 458 aaKnown RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 Q9H8V8 135 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 TRIM45Q9H8W5 580 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 SLC52A3Q9NQ40 469 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 PRSS16Q9NQE7 514 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 GSN-AS1Q9NRJ2 163 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 PTTG2Q9NZH5 202 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 IFNKQ9P0W0 207 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ABCD2Q9UBJ2 740 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 EPHA6Q9UF33 1036 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 LRWD1Q9UFC0 647 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 LNPEPQ9UIQ6 1025 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 ACSL5Q9ULC5 683 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 WDR83OSQ9Y284 106 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 AP3M1Q9Y2T2 418 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 STARD10Q9Y365 291 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 RIPK3Q9Y572 518 aa3.28□□□□□ -1.88
HMGB1P12-201ENST00000438594 FHAD1B1AJZ9 1412 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 LRPPRCP42704 1394 aaKnown RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 EMSYQ7Z589 1322 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 CXorf65A6NEN9 183 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ANTXRLA6NF34 631 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 CCT8L1PA6NM43 557 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 CYSRT1A8MQ03 144 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ERVV-1B6SEH8 477 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 NPIPA3F8WFD2 350 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 RFXANKO14593 260 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZBTB5O15062 677 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 MID1O15344 667 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 EMC8O43402 210 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR10H3O60404 316 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 PSIP1O75475 530 aaKnown RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ADAP1O75689 374 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 BMP10O95393 424 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 NADKO95544 446 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ANP32DO95626 131 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms