RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 CPNE7Q9UBL6 633 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 MGAT4BQ9UQ53 548 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 PCDHGA3Q9Y5H0 932 aa8.84□□□□□ -0.99
CUX1-206ENST00000437600 SPIN1Q9Y657 262 aaPredicted RBP8.84□□□□□ -0.99
CUX1-206ENST00000437600 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.83□□□□□ -1
CUX1-206ENST00000437600 EFCAB10A6NFE3 127 aa8.83□□□□□ -1
CUX1-206ENST00000437600 FAAHO00519 579 aa8.83□□□□□ -1
CUX1-206ENST00000437600 CDC42EP2O14613 210 aa8.83□□□□□ -1
CUX1-206ENST00000437600 CASC3O15234 703 aaKnown RBP8.83□□□□□ -1
CUX1-206ENST00000437600 CCNYL3P0C7X3 344 aa8.83□□□□□ -1
CUX1-206ENST00000437600 UGT2B7P16662 529 aa8.83□□□□□ -1
CUX1-206ENST00000437600 AHRP35869 848 aa8.83□□□□□ -1
CUX1-206ENST00000437600 FZD2Q14332 565 aa8.83□□□□□ -1
CUX1-206ENST00000437600 TAB1Q15750 504 aa8.83□□□□□ -1
CUX1-206ENST00000437600 DUSP5Q16690 384 aa8.83□□□□□ -1
CUX1-206ENST00000437600 ENTPD8Q5MY95 495 aa8.83□□□□□ -1
CUX1-206ENST00000437600 HSDL2Q6YN16 418 aa8.83□□□□□ -1
CUX1-206ENST00000437600 OR8J1Q8NGP2 316 aa8.83□□□□□ -1
CUX1-206ENST00000437600 OR52P1PQ8NH57 321 aa8.83□□□□□ -1
CUX1-206ENST00000437600 S100ZQ8WXG8 99 aa8.83□□□□□ -1
CUX1-206ENST00000437600 EFHD2Q96C19 240 aaPredicted RBP8.83□□□□□ -1
CUX1-206ENST00000437600 DCLRE1CQ96SD1 692 aaKnown RBP8.83□□□□□ -1
CUX1-206ENST00000437600 TTTY10Q9BZA0 68 aa8.83□□□□□ -1
CUX1-206ENST00000437600 ATP13A2Q9NQ11 1180 aa8.83□□□□□ -1
CUX1-206ENST00000437600 OR6C2Q9NZP2 312 aa8.83□□□□□ -1
CUX1-206ENST00000437600 USP36Q9P275 1121 aaKnown RBP8.83□□□□□ -1
CUX1-206ENST00000437600 KLHL3Q9UH77 587 aa8.83□□□□□ -1
CUX1-206ENST00000437600 A6NCN8 305 aa8.83□□□□□ -1
CUX1-206ENST00000437600 CDRT1O95170 752 aa8.83□□□□□ -1
CUX1-206ENST00000437600 APBB3O95704 486 aa8.83□□□□□ -1
CUX1-206ENST00000437600 BCKDHBP21953 392 aa8.83□□□□□ -1
CUX1-206ENST00000437600 MAZP56270 477 aaKnown RBP8.83□□□□□ -1
CUX1-206ENST00000437600 RGS8P57771 180 aaPredicted RBP8.83□□□□□ -1
CUX1-206ENST00000437600 SELENBP1Q13228 472 aa8.83□□□□□ -1
CUX1-206ENST00000437600 SLX4IPQ5VYV7 408 aa8.83□□□□□ -1
CUX1-206ENST00000437600 LAX1Q8IWV1 398 aa8.83□□□□□ -1
CUX1-206ENST00000437600 SAMD14Q8IZD0 417 aaPredicted RBP8.83□□□□□ -1
CUX1-206ENST00000437600 METTL27Q8N6F8 245 aaPredicted RBP8.83□□□□□ -1
CUX1-206ENST00000437600 OR52I1Q8NGK6 324 aa8.83□□□□□ -1
CUX1-206ENST00000437600 SUN5Q8TC36 379 aa8.83□□□□□ -1
CUX1-206ENST00000437600 DNAJA3Q96EY1 480 aa8.83□□□□□ -1
CUX1-206ENST00000437600 ZNF582Q96NG8 517 aaPredicted RBP8.83□□□□□ -1
CUX1-206ENST00000437600 OR2A14Q96R47 310 aa8.83□□□□□ -1
CUX1-206ENST00000437600 RAB11FIP5Q9BXF6 653 aa8.83□□□□□ -1
CUX1-206ENST00000437600 CDCA4Q9BXL8 241 aa8.83□□□□□ -1
CUX1-206ENST00000437600 HDHD5Q9BXW7 423 aa8.83□□□□□ -1
CUX1-206ENST00000437600 MMP27Q9H306 513 aa8.83□□□□□ -1
CUX1-206ENST00000437600 WSB2Q9NYS7 404 aaPredicted RBP8.83□□□□□ -1
CUX1-206ENST00000437600 CLCA2Q9UQC9 943 aa8.83□□□□□ -1
CUX1-206ENST00000437600 MRPS17Q9Y2R5 130 aaKnown RBP8.83□□□□□ -1
CUX1-206ENST00000437600 A0A1W2PRQ8 180 aa8.83□□□□□ -1
CUX1-206ENST00000437600 PRAMEF26H0Y7S4 382 aa8.83□□□□□ -1
CUX1-206ENST00000437600 AP3D1O14617 1153 aa8.83□□□□□ -1
CUX1-206ENST00000437600 KCNK2O95069 426 aa8.83□□□□□ -1
CUX1-206ENST00000437600 LALBAP00709 142 aa8.83□□□□□ -1
CUX1-206ENST00000437600 TNFSF8P32971 234 aa8.83□□□□□ -1
CUX1-206ENST00000437600 ATP6V1E1P36543 226 aa8.83□□□□□ -1
CUX1-206ENST00000437600 SLC15A1P46059 708 aa8.83□□□□□ -1
CUX1-206ENST00000437600 KHKP50053 298 aa8.83□□□□□ -1
CUX1-206ENST00000437600 SLC16A1P53985 500 aa8.83□□□□□ -1
CUX1-206ENST00000437600 PRR5P85299 388 aa8.83□□□□□ -1
CUX1-206ENST00000437600 ELOAQ14241 798 aaKnown RBP8.83□□□□□ -1
CUX1-206ENST00000437600 KIAA0895LQ68EN5 471 aa8.83□□□□□ -1
CUX1-206ENST00000437600 ZNF425Q6IV72 752 aa8.83□□□□□ -1
CUX1-206ENST00000437600 CCBE1Q6UXH8 406 aaPredicted RBP8.83□□□□□ -1
CUX1-206ENST00000437600 ABI3BPQ7Z7G0 1075 aa8.83□□□□□ -1
CUX1-206ENST00000437600 ZAR1Q86SH2 424 aa8.83□□□□□ -1
CUX1-206ENST00000437600 CELF2-AS1Q8N7Q2 184 aa8.83□□□□□ -1
CUX1-206ENST00000437600 GPR151Q8TDV0 419 aa8.83□□□□□ -1
CUX1-206ENST00000437600 FCGR1BQ92637 280 aa8.83□□□□□ -1
CUX1-206ENST00000437600 SHDQ96IW2 340 aa8.83□□□□□ -1
CUX1-206ENST00000437600 CEP19Q96LK0 163 aa8.83□□□□□ -1
CUX1-206ENST00000437600 MCHR1Q99705 422 aa8.83□□□□□ -1
CUX1-206ENST00000437600 ABCB9Q9NP78 766 aa8.83□□□□□ -1
CUX1-206ENST00000437600 ACTR10Q9NZ32 417 aa8.83□□□□□ -1
CUX1-206ENST00000437600 EHD3Q9NZN3 535 aa8.83□□□□□ -1
CUX1-206ENST00000437600 MALT1Q9UDY8 824 aa8.83□□□□□ -1
CUX1-206ENST00000437600 SLC7A7Q9UM01 511 aa8.83□□□□□ -1
CUX1-206ENST00000437600 RP1P56715 2156 aa8.83□□□□□ -1
CUX1-206ENST00000437600 PCDH15Q96QU1 1955 aa8.82□□□□□ -1
CUX1-206ENST00000437600 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.82□□□□□ -1
CUX1-206ENST00000437600 ANKRD34BA5PLL1 514 aa8.82□□□□□ -1
CUX1-206ENST00000437600 A8MVJ9 347 aa8.82□□□□□ -1
CUX1-206ENST00000437600 LOC110117498-PIK3R3F6TDL0 507 aa8.82□□□□□ -1
CUX1-206ENST00000437600 SGK494L7N484 410 aa8.82□□□□□ -1
CUX1-206ENST00000437600 MYL12BO14950 172 aa8.82□□□□□ -1
CUX1-206ENST00000437600 EMC8O43402 210 aa8.82□□□□□ -1
CUX1-206ENST00000437600 UPK1BO75841 260 aa8.82□□□□□ -1
CUX1-206ENST00000437600 NCR1O76036 304 aa8.82□□□□□ -1
CUX1-206ENST00000437600 SNX4O95219 450 aa8.82□□□□□ -1
CUX1-206ENST00000437600 TNFP01375 233 aa8.82□□□□□ -1
CUX1-206ENST00000437600 ALPPP05187 535 aa8.82□□□□□ -1
CUX1-206ENST00000437600 NR2F6P10588 404 aa8.82□□□□□ -1
CUX1-206ENST00000437600 PSMA1P25786 263 aaKnown RBP8.82□□□□□ -1
CUX1-206ENST00000437600 CRYBB2P43320 205 aa8.82□□□□□ -1
CUX1-206ENST00000437600 NR4A2P43354 598 aa8.82□□□□□ -1
CUX1-206ENST00000437600 AGAP7PQ5VUJ5 663 aa8.82□□□□□ -1
CUX1-206ENST00000437600 DESI1Q6ICB0 168 aa8.82□□□□□ -1
CUX1-206ENST00000437600 CDC73Q6P1J9 531 aa8.82□□□□□ -1
CUX1-206ENST00000437600 DGAT2L6Q6ZPD8 337 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms