RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 GP1BAP07359 652 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 CHMP24386 653 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 ATP12AP54707 1039 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 MVKQ03426 396 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 IL11RAQ14626 422 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 MRPL2Q5T653 305 aaKnown RBP14.25□□□□□ -0.13
SGCE-205ENST00000437425 ZNF730Q6ZMV8 503 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 RBM44Q6ZP01 1051 aaKnown RBP14.25□□□□□ -0.13
SGCE-205ENST00000437425 ZNF550Q7Z398 422 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 B3GNT8Q7Z7M8 397 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 ENTHD1Q8IYW4 607 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 PTPMT1Q8WUK0 201 aaPredicted RBP14.25□□□□□ -0.13
SGCE-205ENST00000437425 FAM122AQ96E09 287 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 SLC41A3Q96GZ6 507 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 Q96MT0 163 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 GFM1Q96RP9 751 aaKnown RBP14.25□□□□□ -0.13
SGCE-205ENST00000437425 PRRG3Q9BZD7 231 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 REV1Q9UBZ9 1251 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 FTSJ1Q9UET6 329 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 ATXN7L1Q9ULK2 861 aaPredicted RBP14.25□□□□□ -0.13
SGCE-205ENST00000437425 GPR55Q9Y2T6 319 aaPredicted RBP14.25□□□□□ -0.13
SGCE-205ENST00000437425 PCDH15Q96QU1 1955 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 PI4KAP42356 2102 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 ARID1BQ8NFD5 2236 aaPredicted RBP14.24□□□□□ -0.13
SGCE-205ENST00000437425 CPSF4LA6NMK7 179 aaKnown RBP14.24□□□□□ -0.13
SGCE-205ENST00000437425 CT45A8P0DMV1 189 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 CT45A9P0DMV2 189 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 POU2F1P14859 743 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 EPHA2P29317 976 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 GRK6P43250 576 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 OCA2Q04671 838 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 TSPAN31Q12999 210 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 CT45A2Q5DJT8 189 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 LAIR2Q6ISS4 152 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 ZNF613Q6PF04 617 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 ZNF440Q8IYI8 595 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 SHISA5Q8N114 240 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 ZNF527Q8NB42 609 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 ZNF420Q8TAQ5 688 aaPredicted RBP14.24□□□□□ -0.13
SGCE-205ENST00000437425 CNIH3Q8TBE1 160 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 CCDC74BQ96LY2 380 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 OR6C1Q96RD1 312 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 TEX12Q9BXU0 123 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 RBM38Q9H0Z9 239 aaKnown RBP14.24□□□□□ -0.13
SGCE-205ENST00000437425 POLR1BQ9H9Y6 1135 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 TMEM27Q9HBJ8 222 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 FSCN3Q9NQT6 498 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 PNO1Q9NRX1 252 aaKnown RBP14.24□□□□□ -0.13
SGCE-205ENST00000437425 COPS7AQ9UBW8 275 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 RNF6Q9Y252 685 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 COMMD3-BMI1R4GMX3 469 aa14.24□□□□□ -0.13
SGCE-205ENST00000437425 CABIN1Q9Y6J0 2220 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 A0A087WUU8 490 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 NPIPB9F8W1W9 429 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 KHNYNO15037 678 aaKnown RBP14.23□□□□□ -0.13
SGCE-205ENST00000437425 FAM20BO75063 409 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 AGXTP21549 392 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 IDH2P48735 452 aaKnown RBP14.23□□□□□ -0.13
SGCE-205ENST00000437425 ZNF136P52737 540 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 SLC37A1P57057 533 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 SLC35A2P78381 396 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 NSDHLQ15738 373 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 MAPK14Q16539 360 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 SLX4IPQ5VYV7 408 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 CASP12Q6UXS9 341 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 MBOAT2Q6ZWT7 520 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 GDF7Q7Z4P5 450 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 HMGN2P46Q86SG4 172 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 PPP1R3BQ86XI6 285 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 SPARTQ8N0X7 666 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 RCBTB1Q8NDN9 531 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 ZNF540Q8NDQ6 660 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 DOK4Q8TEW6 326 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 MYDGFQ969H8 173 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 HS6ST2Q96MM7 605 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 TRIM2Q9C040 744 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 SEMA4GQ9NTN9 838 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 SIDT1Q9NXL6 827 aaKnown RBP14.23□□□□□ -0.13
SGCE-205ENST00000437425 SLC35A3Q9Y2D2 325 aa14.23□□□□□ -0.13
SGCE-205ENST00000437425 NUP210LQ5VU65 1888 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 CCDC160A6NGH7 325 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 FRG2CA6NGY1 282 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 PATE3B3GLJ2 98 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 H3BN98 237 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 PEX12O00623 359 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 NTN3O00634 580 aaPredicted RBP14.22□□□□□ -0.13
SGCE-205ENST00000437425 TPST2O60704 377 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 SCRG1O75711 98 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 IGKV3-11P04433 115 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 ITIH1P19827 911 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 ENDOUP21128 410 aaKnown RBP14.22□□□□□ -0.13
SGCE-205ENST00000437425 MMP11P24347 488 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 FPR3P25089 353 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 CSTF2P33240 577 aaKnown RBP eCLIP14.22□□□□□ -0.13
SGCE-205ENST00000437425 KRT20P35900 424 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 ADH7P40394 386 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 STAT5AP42229 794 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 GSSP48637 474 aa14.22□□□□□ -0.13
SGCE-205ENST00000437425 SNRPGP62308 76 aaKnown RBP14.22□□□□□ -0.13
SGCE-205ENST00000437425 DCDP81605 110 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms