RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 AMIGO1Q86WK6 493 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 KLBQ86Z14 1044 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 CPOQ8IVL8 374 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 KLHL36Q8N4N3 616 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 NLGN4YQ8NFZ3 816 aaPredicted RBP11.02□□□□□ -0.65
CD44-209ENST00000433892 OR2T33Q8NG76 320 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 LCN9Q8WX39 176 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 NACC2Q96BF6 587 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 C10orf90Q96M02 699 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 FRMD6Q96NE9 622 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 DEPDC7Q96QD5 511 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 FYTTD1Q96QD9 318 aaKnown RBP11.02□□□□□ -0.65
CD44-209ENST00000433892 SNX18Q96RF0 628 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 ATF6BQ99941 703 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 C1QTNF2Q9BXJ5 285 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 PLA2G2FQ9BZM2 168 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 RNF121Q9H920 327 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 FGF22Q9HCT0 170 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 RANGRFQ9HD47 186 aaPredicted RBP11.02□□□□□ -0.65
CD44-209ENST00000433892 HINT3Q9NQE9 182 aaKnown RBP11.02□□□□□ -0.65
CD44-209ENST00000433892 WDR45Q9Y484 360 aa11.02□□□□□ -0.65
CD44-209ENST00000433892 C2orf16Q68DN1 1984 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 TRBV23OR9-2A0A075B6M9 112 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 ZC3H12DA2A288 527 aaKnown RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 C5orf67F2Z3F1 127 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 DNAJB6O75190 326 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 HLA-DPB1P04440 258 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 TEAD1P28347 426 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 HTR1FP30939 366 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 GCGRP47871 477 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 ARFIP1P53367 373 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 RACK1P63244 317 aaKnown RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 SIM1P81133 766 aaPredicted RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 IL18Q14116 193 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 LCN1P1Q5VSP4 162 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 VASNQ6EMK4 673 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 LRRC25Q8N386 305 aaPredicted RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 SIRT6Q8N6T7 355 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 OR51G2Q8NGK0 314 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 ENKURQ8TC29 256 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 ZFPM2Q8WW38 1151 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 SLC7A6Q92536 515 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 KIAA1143Q96AT1 154 aaPredicted RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 SENP5Q96HI0 755 aaPredicted RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 ART5Q96L15 291 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 APOOQ9BUR5 198 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 MKRN2Q9H000 416 aaKnown RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 PPP1R3EQ9H7J1 279 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 MTHFD2LQ9H903 347 aaPredicted RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 ISG20L2Q9H9L3 353 aaKnown RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 LYARQ9NX58 379 aaKnown RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 NLGN3Q9NZ94 848 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 H2AFY2Q9P0M6 372 aaPredicted RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 TBC1D29Q9UFV1 150 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 EXOGQ9Y2C4 368 aaKnown RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 RWDD3Q9Y3V2 267 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 GSAPA4D1B5 854 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 FAM172BPA6NC97 362 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 DUXAA6NLW8 204 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 CHST10O43529 356 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 RNGTTO60942 597 aaKnown RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 OR5F1O95221 314 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 IGHA1P01876 353 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 PRG2P13727 222 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 NDUFV2P19404 249 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 CD83Q01151 205 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 FZD5Q13467 585 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 GPR68Q15743 365 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 DUSP5Q16690 384 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 TRIQKQ629K1 86 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 PLBD1Q6P4A8 553 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 SMARCD3Q6STE5 483 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 ZNF322Q6U7Q0 402 aaPredicted RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 ZNF836Q6ZNA1 936 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 C19orf18Q8NEA5 215 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 ZCCHC10Q8TBK6 192 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 MS4A4EQ96PG1 132 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 UBQLN3Q9H347 655 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 TRIM45Q9H8W5 580 aaPredicted RBP11.01□□□□□ -0.65
CD44-209ENST00000433892 MED20Q9H944 212 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 RMI1Q9H9A7 625 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 CERS4Q9HA82 394 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 B3GAT2Q9NPZ5 323 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 PLSCR3Q9NRY6 295 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 TNFRSF10DQ9UBN6 386 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 PRKAG2Q9UGJ0 569 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 ZNF232Q9UNY5 417 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 CDH10Q9Y6N8 788 aa11.01□□□□□ -0.65
CD44-209ENST00000433892 VCANP13611 3396 aa11□□□□□ -0.65
CD44-209ENST00000433892 SCN2AQ99250 2005 aa11□□□□□ -0.65
CD44-209ENST00000433892 APODP05090 189 aa11□□□□□ -0.65
CD44-209ENST00000433892 PSKH1P11801 424 aa11□□□□□ -0.65
CD44-209ENST00000433892 CPN2P22792 545 aa11□□□□□ -0.65
CD44-209ENST00000433892 AK4P27144 223 aaPredicted RBP11□□□□□ -0.65
CD44-209ENST00000433892 ID2Q02363 134 aa11□□□□□ -0.65
CD44-209ENST00000433892 QPRTQ15274 297 aa11□□□□□ -0.65
CD44-209ENST00000433892 TMEM44Q2T9K0 475 aa11□□□□□ -0.65
CD44-209ENST00000433892 DEFB134Q4QY38 66 aa11□□□□□ -0.65
CD44-209ENST00000433892 EOGTQ5NDL2 527 aa11□□□□□ -0.65
CD44-209ENST00000433892 CDC73Q6P1J9 531 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms