RNA–Protein interactions for RNA: ENST00000433669.1

LINC00954-201, long intergenic non-protein coding RNA 954, humanhuman

TSL 2 BASIC

Gene LINC00954, Length 2,472 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-201ENST00000433669 SATB2Q9UPW6 733 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 PMF1-BGLAPU3KQ54 211 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 IGHV5-51A0A0C4DH38 117 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 HYKKA2RU49 373 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 NID1P14543 1247 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 IL9P15248 144 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 GNSP15586 552 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 CSTF2P33240 577 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC00954-201ENST00000433669 ZNF136P52737 540 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 SKP1P63208 163 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 BTG2P78543 158 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 ITGADQ13349 1161 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 MEDAGQ5VYS4 303 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 SLC30A6Q6NXT4 461 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 ARHGEF39Q8N4T4 335 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 FNDC8Q8TC99 324 aa11.35□□□□□ -0.59
LINC00954-201ENST00000433669 ZNF582Q96NG8 517 aaPredicted RBP11.35□□□□□ -0.59
LINC00954-201ENST00000433669 MRPS33Q9Y291 106 aaKnown RBP11.35□□□□□ -0.59
LINC00954-201ENST00000433669 CLDN25C9JDP6 229 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 HRKO00198 91 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 APOL3O95236 402 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 SSTR4P31391 388 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 RPS3AP61247 264 aaKnown RBP11.34□□□□□ -0.59
LINC00954-201ENST00000433669 HNRNPKP61978 463 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC00954-201ENST00000433669 ZNHIT3Q15649 155 aaPredicted RBP11.34□□□□□ -0.59
LINC00954-201ENST00000433669 LRIT3Q3SXY7 679 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 FLYWCH1Q4VC44 716 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 RASSF6Q6ZTQ3 369 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 MBOAT2Q6ZWT7 520 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 ZAR1Q86SH2 424 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 CADM4Q8NFZ8 388 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 OR4N2Q8NGD1 307 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 SLC38A2Q96QD8 506 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 PHOX2BQ99453 314 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 CENPOQ9BU64 300 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 HMG20AQ9NP66 347 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 UCKL1Q9NWZ5 548 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 NLGN3Q9NZ94 848 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 SYNDIG1LA6NDD5 238 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 RHPN2P1A8MT19 583 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 TGFBR3LH3BV60 316 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 CCRL2O00421 344 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 CLDN4O14493 209 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 MAGEB3O15480 346 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 KIAA0513O60268 411 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 BRINP1O60477 761 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 COQ9O75208 318 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 KCNK2O95069 426 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 MAOAP21397 527 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 HTR2AP28223 471 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 IDUAP35475 653 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 PGDP52209 483 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 DOC2BQ14184 412 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 ZNF267Q14586 743 aaPredicted RBP11.34□□□□□ -0.59
LINC00954-201ENST00000433669 OR1Q1Q15612 314 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 PAQR6Q6TCH4 344 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 USP43Q70EL4 1123 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 BTLAQ7Z6A9 289 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 ABTB1Q969K4 478 aaPredicted RBP11.34□□□□□ -0.59
LINC00954-201ENST00000433669 VMP1Q96GC9 406 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 CNPPD1Q9BV87 410 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 SLIRPQ9GZT3 109 aaKnown RBP11.34□□□□□ -0.59
LINC00954-201ENST00000433669 PRTFDC1Q9NRG1 225 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 OSGIN1Q9UJX0 560 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 CEP192Q8TEP8 1941 aa11.34□□□□□ -0.59
LINC00954-201ENST00000433669 TRAPPC13A5PLN9 417 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 CDHR4A6H8M9 788 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 LILRA5A6NI73 299 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 KPNA4O00629 521 aaPredicted RBP11.33□□□□□ -0.6
LINC00954-201ENST00000433669 ARHGAP33O14559 1287 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 CTNSO60931 367 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 CSO75390 466 aaKnown RBP11.33□□□□□ -0.6
LINC00954-201ENST00000433669 AK1P00568 194 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 RPS4Y1P22090 263 aaKnown RBP11.33□□□□□ -0.6
LINC00954-201ENST00000433669 SOX3P41225 446 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 MAP3K8P41279 467 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 STAT5AP42229 794 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 TUBA1BP68363 451 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 ZNF846Q147U1 533 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 SPHARQ15513 63 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 EXOSC6Q5RKV6 272 aaKnown RBP11.33□□□□□ -0.6
LINC00954-201ENST00000433669 TUBA1AQ71U36 451 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 MCFD2Q8NI22 146 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 TMEM163Q8TC26 289 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 OSTF1Q92882 214 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 AHCYL2Q96HN2 611 aaKnown RBP11.33□□□□□ -0.6
LINC00954-201ENST00000433669 SHDQ96IW2 340 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 DGAT2Q96PD7 388 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 YIPF2Q9BWQ6 316 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 SPRTNQ9H040 489 aaPredicted RBP11.33□□□□□ -0.6
LINC00954-201ENST00000433669 PRO3102Q9H379 93 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 FOLH1BQ9HBA9 442 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 PDE7BQ9NP56 450 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 PLCL2Q9UPR0 1127 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 MAU2Q9Y6X3 613 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 UNC13CQ8NB66 2214 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 LMO7DNF2Z398 122 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 CDC42EP2O14613 210 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 MYL12BO14950 172 aa11.33□□□□□ -0.6
LINC00954-201ENST00000433669 NKX2-2O95096 273 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms