RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 PTPN6P29350 595 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 ADSLP30566 484 aaPredicted RBP13.3□□□□□ -0.28
SGCE-204ENST00000428696 DCTP40126 519 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 DSTNP60981 165 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 HSF1Q00613 529 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 FOXO1Q12778 655 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 RGNQ15493 299 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 SYPL1Q16563 259 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 EXOSC6Q5RKV6 272 aaKnown RBP13.3□□□□□ -0.28
SGCE-204ENST00000428696 TIGD3Q6B0B8 471 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 REP15Q6BDI9 236 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 ANKFN1Q8N957 763 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 PCYOX1LQ8NBM8 494 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 OR4K17Q8NGC6 315 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 PRR7Q8TB68 274 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 PHOSPHO1Q8TCT1 267 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 RCN3Q96D15 328 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 SH3YL1Q96HL8 342 aaPredicted RBP13.3□□□□□ -0.28
SGCE-204ENST00000428696 LRRC37BQ96QE4 947 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 HOXD1Q9GZZ0 328 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 PIF1Q9H611 641 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 MED11Q9P086 117 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 WDR45Q9Y484 360 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 WIF1Q9Y5W5 379 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 C5orf58C9J3I9 102 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 H3BNH8 94 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 FADS1O60427 444 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 H6PDO95479 791 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 AK1P00568 194 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 NUDT7P0C024 238 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 COX4I1P13073 169 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 TBXA2RP21731 343 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 PPIBP23284 216 aaKnown RBP13.3□□□□□ -0.28
SGCE-204ENST00000428696 PTGDSP41222 190 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 ATP12AP54707 1039 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 MTPNP58546 118 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 FOXK1P85037 733 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 CHRNEQ04844 493 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 ART3Q13508 389 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 EIF2S3LQ2VIR3 472 aaKnown RBP13.3□□□□□ -0.28
SGCE-204ENST00000428696 KRTCAP3Q53RY4 240 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 LRIF1Q5T3J3 769 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 APOOLQ6UXV4 268 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 DLEU7Q6UYE1 221 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 PLCZ1Q86YW0 608 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 MSRB3Q8IXL7 192 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 FAM109AQ8N4B1 249 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 RP9Q8TA86 221 aaKnown RBP13.3□□□□□ -0.28
SGCE-204ENST00000428696 MIB2Q96AX9 1013 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 TMEM41AQ96HV5 264 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 SLC39A3Q9BRY0 314 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 CCDC106Q9BWC9 280 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 RTN4RQ9BZR6 473 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 DSN1Q9H410 356 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 GID8Q9NWU2 228 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 P2RX2Q9UBL9 471 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 ABCG2Q9UNQ0 655 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 LIPT1Q9Y234 373 aa13.3□□□□□ -0.28
SGCE-204ENST00000428696 LRRC3CA6NJW4 275 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 BBIP1A8MTZ0 92 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 J3QKU1 62 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 NDUFAB1O14561 156 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 SNPHO15079 494 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 SLC22A2O15244 555 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 CBR3O75828 277 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 DCTN3O75935 186 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 GLSO94925 669 aaPredicted RBP13.29□□□□□ -0.28
SGCE-204ENST00000428696 BCHEP06276 602 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 EDN3P14138 238 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 PLA2G2AP14555 144 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 ELAVL4P26378 380 aaKnown RBP13.29□□□□□ -0.28
SGCE-204ENST00000428696 C17orf67Q0P5P2 114 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 CYP51A1Q16850 503 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 RUNDC3AQ59EK9 446 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 CMPK2Q5EBM0 449 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 PDZK1Q5T2W1 519 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 YRDCQ86U90 279 aaKnown RBP13.29□□□□□ -0.28
SGCE-204ENST00000428696 TREML1Q86YW5 311 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 DPP10Q8N608 796 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 WDSUB1Q8N9V3 476 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 CCDC197Q8NCU1 140 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 CHDHQ8NE62 594 aaPredicted RBP13.29□□□□□ -0.28
SGCE-204ENST00000428696 OR14L1PQ8NHC6 308 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 MAL2Q969L2 176 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 CMTM5Q96DZ9 223 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 GPR137Q96N19 417 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 CGREF1Q99674 301 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 QRSL1Q9H0R6 528 aaKnown RBP13.29□□□□□ -0.28
SGCE-204ENST00000428696 CACYBPQ9HB71 228 aaKnown RBP13.29□□□□□ -0.28
SGCE-204ENST00000428696 SH3BGRL2Q9UJC5 107 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 DKKL1Q9UK85 242 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 FBXL2Q9UKC9 423 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 CORO2BQ9UQ03 480 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 OSGIN2Q9Y236 505 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 RPH3AQ9Y2J0 694 aaPredicted RBP13.29□□□□□ -0.28
SGCE-204ENST00000428696 C15orf41Q9Y2V0 281 aa13.29□□□□□ -0.28
SGCE-204ENST00000428696 RP1L1Q8IWN7 2480 aaPredicted RBP13.28□□□□□ -0.28
SGCE-204ENST00000428696 A0A1B0GTH9 108 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 HCRTR2O43614 444 aa13.28□□□□□ -0.28
SGCE-204ENST00000428696 SHOX2O60902 331 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms