RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 RAB3IL1Q8TBN0 382 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 GTPBP3Q969Y2 492 aaKnown RBP16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 APIPQ96GX9 242 aa16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 TACO1Q9BSH4 297 aaKnown RBP16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 DDX18Q9NVP1 670 aaKnown RBP16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 MRTO4Q9UKD2 239 aaKnown RBP16.38■□□□□ 0.21
UPK3BP1-201ENST00000428678 A0A087WV62 115 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 ESYT3A0FGR9 886 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 CLOCKO15516 846 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 ULK1O75385 1050 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 UTS2O95399 124 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 IL33O95760 270 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 ANGPTL1O95841 491 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 OPN1LWP04000 364 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 COL6A2P12110 1019 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 HMOX2P30519 316 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 TIA1P31483 386 aaKnown RBP eCLIP16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 IDUAP35475 653 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 PSMD4P55036 377 aaKnown RBP16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 CLCQ05315 142 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 BTKQ06187 659 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 ZNF844Q08AG5 666 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 C17orf67Q0P5P2 114 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 TMEM44Q2T9K0 475 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 TEX35Q5T0J7 233 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 GPRIN3Q6ZVF9 776 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 METTL6Q8TCB7 284 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 C1QTNF3Q9BXJ4 246 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 C12orf49Q9H741 205 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 YAE1D1Q9NRH1 226 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 NINJ2Q9NZG7 142 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 C19orf53Q9UNZ5 99 aaPredicted RBP16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 GPR52Q9Y2T5 361 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 RNF115Q9Y4L5 304 aa16.37■□□□□ 0.21
UPK3BP1-201ENST00000428678 MYO1GB0I1T2 1018 aa16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 CXCL13O43927 109 aa16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 SUPT7LO94864 414 aa16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 ANXA4P09525 319 aaPredicted RBP16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 PSMB1P20618 241 aaKnown RBP16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 IL11P20809 199 aa16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 HTR6P50406 440 aa16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 WDR75Q8IWA0 830 aaKnown RBP16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 FBXW5Q969U6 566 aa16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 SHCBP1LQ9BZQ2 653 aa16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 OR10A4Q9H209 315 aa16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 GLRX2Q9NS18 164 aa16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 PAQR5Q9NXK6 330 aaPredicted RBP16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 FREM1Q5H8C1 2179 aa16.36■□□□□ 0.21
UPK3BP1-201ENST00000428678 IGLV3-32A0A0A0MS00 114 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 OVOL3O00110 214 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 UPK1AO00322 258 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 TLX2O43763 284 aaPredicted RBP16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 SLITRK5O94991 958 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 SOD3P08294 240 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 SBK3P0C264 359 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 ZNF17P17021 662 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 DDCP20711 480 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 ACVR1BP36896 505 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 CDKN1AP38936 164 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 SERPINB9P50453 376 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 PRR5P85299 388 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 C2orf80Q0P641 193 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 PRSS53Q2L4Q9 553 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 GRAMD1BQ3KR37 738 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 APOOLQ6UXV4 268 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 GALNT10Q86SR1 603 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 CEP112Q8N8E3 955 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 STEAP2Q8NFT2 490 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 LILRB1Q8NHL6 650 aaPredicted RBP16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 SLC9A6Q92581 669 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 S100PBPQ96BU1 408 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 ZNF382Q96SR6 550 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 MIEF1Q9NQG6 463 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 ALPK2Q86TB3 2170 aa16.35■□□□□ 0.21
UPK3BP1-201ENST00000428678 GXYLT2A0PJZ3 443 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 TNFSF11O14788 317 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 CD5LO43866 347 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 PSMG1O95456 288 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 TUBBP07437 444 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 CD3EP07766 207 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 AGTR1P30556 359 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 NTSP30990 170 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 GABRA3P34903 492 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 SLC7A5Q01650 507 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 ZNF763Q0D2J5 394 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 UNC50Q53HI1 259 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 SPDYAQ5MJ70 313 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 ADAM5Q6NVV9 412 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 GALNT18Q6P9A2 607 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 HIPK1Q86Z02 1210 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 ZNF619Q8N2I2 560 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 OR2L13Q8N349 312 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 GTPBP8Q8N3Z3 284 aaPredicted RBP16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 OR2V1Q8NHB1 315 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 SMAP2Q8WU79 429 aaPredicted RBP16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 TMEM158Q8WZ71 300 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 ZBED6CLQ96FA7 236 aaPredicted RBP16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 ADGRG7Q96K78 797 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 PAFAH2Q99487 392 aa16.34■□□□□ 0.21
UPK3BP1-201ENST00000428678 NPAS1Q99742 590 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms