RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 NPIPB9F8W1W9 429 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 NPIPA3F8WFD2 350 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 SDHDO14521 159 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 DYNC1I1O14576 645 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF195O14628 629 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 HCRTR2O43614 444 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 CDC40O60508 579 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMC1A-203ENST00000428014 DNAJA2O60884 412 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 WISP2O76076 250 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 KCNK2O95069 426 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 RNF224P0DH78 156 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 PEPDP12955 493 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 CYP4B1P13584 511 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 UQCRC2P22695 453 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 FKBP2P26885 142 aaKnown RBP8.31□□□□□ -1.08
SMC1A-203ENST00000428014 ELK4P28324 431 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 EIF1P41567 113 aaKnown RBP8.31□□□□□ -1.08
SMC1A-203ENST00000428014 DLX5P56178 289 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 WNT3P56703 355 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 HBA1P69905 142 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 POU6F2P78424 691 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-203ENST00000428014 PRR20EP86478 221 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 PRR20CP86479 221 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 PRR20DP86480 221 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 PRR20BP86481 221 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 PRR20AP86496 221 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 FGFBP1Q14512 234 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 ZSWIM7Q19AV6 140 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 TMEM44Q2T9K0 475 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 C1orf185Q5T7R7 199 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 HEPHL1Q6MZM0 1159 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 FAM180BQ6P0A1 224 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 ANGPTL8Q6UXH0 198 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF527Q8NB42 609 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 SLC16A11Q8NCK7 471 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 FAM83FQ8NEG4 500 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-203ENST00000428014 OR7A2PQ8NGA2 310 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 CDC26Q8NHZ8 85 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 CA5BP1Q8WTZ4 195 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF75CPQ92670 426 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-203ENST00000428014 ABTB1Q969K4 478 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-203ENST00000428014 CIDECQ96AQ7 238 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-203ENST00000428014 ZBTB8AQ96BR9 441 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 NEURL3Q96EH8 262 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 C14orf79Q96F83 325 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 LRRC46Q96FV0 321 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 GNRHR2Q96P88 292 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 PIGQQ9BRB3 760 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 SAP130Q9H0E3 1048 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 DEFB127Q9H1M4 99 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 TSPAN10Q9H1Z9 355 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-203ENST00000428014 ALG2Q9H553 416 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF395Q9H8N7 513 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-203ENST00000428014 LIPT1Q9Y234 373 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 FAM215AQ9Y5M1 114 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 GPR45Q9Y5Y3 372 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 ARHGAP21Q5T5U3 1957 aa8.31□□□□□ -1.08
SMC1A-203ENST00000428014 WDR91A4D1P6 747 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 H3BNH8 94 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 AKAP10O43572 662 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 ZIC3O60481 467 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 EIF4E2O60573 245 aaKnown RBP8.3□□□□□ -1.08
SMC1A-203ENST00000428014 LRATO95237 230 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 UTS2O95399 124 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 PGRP06401 933 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 GLI4P10075 376 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 ZNF708P17019 499 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 BMP7P18075 431 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 GABRA3P34903 492 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 RFC3P40938 356 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 ZFP36L2P47974 494 aaKnown RBP8.3□□□□□ -1.08
SMC1A-203ENST00000428014 ATP4BP51164 291 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 MAP2K6P52564 334 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 RCAN2Q14206 197 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 PDCD2Q16342 344 aaPredicted RBP8.3□□□□□ -1.08
SMC1A-203ENST00000428014 DUSP5Q16690 384 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 ACSF3Q4G176 576 aaPredicted RBP8.3□□□□□ -1.08
SMC1A-203ENST00000428014 KLHL26Q53HC5 615 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 RTL6Q6ICC9 239 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 VASH1Q7L8A9 365 aaPredicted RBP8.3□□□□□ -1.08
SMC1A-203ENST00000428014 IFNEQ86WN2 208 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 GTPBP8Q8N3Z3 284 aaPredicted RBP8.3□□□□□ -1.08
SMC1A-203ENST00000428014 COX18Q8N8Q8 333 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 OR2M3Q8NG83 312 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 OR5M3Q8NGP4 307 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 AGR3Q8TD06 166 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 GPR151Q8TDV0 419 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 ADAMTS15Q8TE58 950 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 TSPEARQ8WU66 669 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 GFM2Q969S9 779 aaKnown RBP8.3□□□□□ -1.08
SMC1A-203ENST00000428014 ARSGQ96EG1 525 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 C1GALT1C1Q96EU7 318 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 WDYHV1Q96HA8 205 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 TM9SF2Q99805 663 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 CCDC28BQ9BUN5 200 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 UGT2B28Q9BY64 529 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 NUF2Q9BZD4 464 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 TBL1XR1Q9BZK7 514 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 CXorf36Q9H7Y0 433 aa8.3□□□□□ -1.08
SMC1A-203ENST00000428014 GP6Q9HCN6 339 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms