RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 TMEM71Q6P5X7 295 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 VASH1Q7L8A9 365 aaPredicted RBP10.01□□□□□ -0.81
TCOF1-204ENST00000427724 BTLAQ7Z6A9 289 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 C7orf57Q8NEG2 295 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 OR2L3Q8NG85 312 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 TMEM203Q969S6 136 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 GAL3ST3Q96A11 431 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 ZNF583Q96ND8 569 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 COMMD3Q9UBI1 195 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 ADAM30Q9UKF2 790 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 CAMK2AQ9UQM7 478 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 LTBP1Q14766 1721 aa10.01□□□□□ -0.81
TCOF1-204ENST00000427724 CREBBPQ92793 2442 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 HRO43593 1189 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 RAD1O60671 282 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 KIR2DL1P43626 348 aaPredicted RBP10□□□□□ -0.81
TCOF1-204ENST00000427724 SLC6A9P48067 706 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 RPS26P62854 115 aaKnown RBP10□□□□□ -0.81
TCOF1-204ENST00000427724 ZNF45Q02386 682 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 NPRL3Q12980 569 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 SMN1Q16637 294 aaKnown RBP10□□□□□ -0.81
TCOF1-204ENST00000427724 IQCCQ4KMZ1 466 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 PMS2CLQ68D20 193 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 RASSF6Q6ZTQ3 369 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 TIGD4Q8IY51 512 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 ZNF740Q8NDX6 193 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 OR1N1Q8NGS0 311 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 C8orf44Q96CB5 159 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 GABRG3Q99928 467 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 LRFN3Q9BTN0 628 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 G6PC3Q9BUM1 346 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 POLR2J2Q9GZM3 115 aaKnown RBP10□□□□□ -0.81
TCOF1-204ENST00000427724 OR51V1Q9H2C8 321 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 DIABLOQ9NR28 239 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10□□□□□ -0.81
TCOF1-204ENST00000427724 MRPL39Q9NYK5 338 aaKnown RBP10□□□□□ -0.81
TCOF1-204ENST00000427724 SLC23A2Q9UGH3 650 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 ASB1Q9Y576 335 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 EEF1E1-BLOC1S5C9J1V9 151 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 EEF1E1O43324 174 aaKnown RBP10□□□□□ -0.81
TCOF1-204ENST00000427724 STK17BO94768 372 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 OR12D1P0DN82 309 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 C4BPBP20851 252 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 STARD6P59095 220 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 TAP2Q03519 686 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 HSF2Q03933 536 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 MESP2Q0VG99 397 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 METRNLQ641Q3 311 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 TMPPEQ6ZT21 453 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 VWA5B2Q8N398 1253 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 OR52E4Q8NGH9 312 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 HIST1H2AAQ96QV6 131 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 PELI2Q9HAT8 420 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 STOML2Q9UJZ1 356 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 FAM208BQ5VWN6 2430 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 PLXNB2O15031 1838 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 NPIPA5E9PKD4 350 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 C11orf98E9PRG8 122 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 MEN1O00255 615 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 ARNTLO00327 626 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 ICMTO60725 284 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 LAMP1P11279 417 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 DCDC1P59894 354 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 PLP2Q04941 152 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 LCN1P1Q5VSP4 162 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 TMEM178AQ8NBL3 297 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 OR6K6Q8NGW6 343 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 PIGXQ8TBF5 258 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 ASB11Q8WXH4 323 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 FRMD6Q96NE9 622 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 MED28Q9H204 178 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 B3GAT2Q9NPZ5 323 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 SLC35C2Q9NQQ7 365 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 DCAF13Q9NV06 445 aaKnown RBP10□□□□□ -0.81
TCOF1-204ENST00000427724 NUFIP1Q9UHK0 495 aaKnown RBP10□□□□□ -0.81
TCOF1-204ENST00000427724 NPIPA1Q9UND3 350 aa10□□□□□ -0.81
TCOF1-204ENST00000427724 PRAMEF33A0A0G2JMD5 474 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 A0A1B0GW55 424 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 A0A1B0GX78 115 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 EMC8O43402 210 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 PRAMEF10O60809 474 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 STSP08842 583 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 POU2F2P09086 479 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 DUX4L2P0CJ85 424 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 DUX4L3P0CJ86 424 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 DUX4L4P0CJ87 422 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 DUX4L5P0CJ88 424 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 DUX4L6P0CJ89 424 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 DUX4L7P0CJ90 424 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 UQCRC1P31930 480 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 EIF1AXP47813 144 aaKnown RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 EMX1Q04741 257 aaPredicted RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 ST3GAL4Q11206 333 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 EIF3IQ13347 325 aaKnown RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 FZD2Q14332 565 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 CLEC12AQ5QGZ9 265 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 ANKRD34AQ69YU3 496 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 RPS19BP1Q86WX3 136 aaKnown RBP9.99□□□□□ -0.81
TCOF1-204ENST00000427724 VRK3Q8IV63 474 aa9.99□□□□□ -0.81
TCOF1-204ENST00000427724 CACTIN-AS1Q8N1I8 211 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms