RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 OLFML2AQ68BL7 652 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF660Q6AZW8 331 aaPredicted RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR5M10Q6IEU7 315 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 PDE12Q6L8Q7 609 aaKnown RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SWSAP1Q6NVH7 229 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 PAPD4Q6PIY7 484 aaKnown RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SUSD1Q6UWL2 747 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 VITQ6UXI7 678 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 CD300LDQ6UXZ3 194 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF783Q6ZMS7 281 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 Q6ZSR9 355 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 MAMDC2Q7Z304 686 aaPredicted RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 VRK3Q8IV63 474 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 PHACTR4Q8IZ21 702 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 GTPBP8Q8N3Z3 284 aaPredicted RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 LNX2Q8N448 690 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 HDDC3Q8N4P3 179 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 TRAM1L1Q8N609 369 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZNF283Q8N7M2 679 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 C7orf31Q8N865 590 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SAMD12Q8N8I0 201 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 L3MBTL4Q8NA19 623 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 TEX19Q8NA77 164 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 INO80EQ8NBZ0 244 aaPredicted RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC24A4Q8NFF2 622 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR10H5Q8NGA6 315 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR5R1Q8NH85 324 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 IL31RAQ8NI17 732 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 PHOSPHO1Q8TCT1 267 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 UBTD2Q8WUN7 234 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 TNFAIP8L1Q8WVP5 186 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 FCAMRQ8WWV6 532 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SORCS1Q8WY21 1168 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC41A3Q96GZ6 507 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 RPL10LQ96L21 214 aaKnown RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZDHHC15Q96MV8 337 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 WFIKKN1Q96NZ8 548 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC2A13Q96QE2 648 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 KCNA7Q96RP8 456 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 ORAI2Q96SN7 254 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 ZIC5Q96T25 663 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 NPY6RQ99463 290 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 VRK1Q99986 396 aaPredicted RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 AP5M1Q9H0R1 490 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SYT4Q9H2B2 425 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 DBNDD1Q9H9R9 158 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 MIEF1Q9NQG6 463 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 TLR8Q9NR97 1041 aaKnown RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 MAN2C1Q9NTJ4 1040 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMEM248Q9NWD8 314 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMEM161AQ9NX61 479 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SLC25A37Q9NYZ2 338 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 OR6C2Q9NZP2 312 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 PTGFRNQ9P2B2 879 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 UXTQ9UBK9 157 aaPredicted RBP5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 GIMAP2Q9UG22 337 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 OPN4Q9UHM6 478 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 FBXW11Q9UKB1 542 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 LRFN2Q9ULH4 789 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 TMED3Q9Y3Q3 217 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 WIF1Q9Y5W5 379 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 SNX11Q9Y5W9 270 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 PIAS3Q9Y6X2 628 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 ENPP4Q9Y6X5 453 aa5.28□□□□□ -1.56
VTI1BP4-201ENST00000427516 DSPPQ9NZW4 1301 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TCRBV16S1A1N1A0A5B0 115 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TMEM200CA6NKL6 621 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 CHURC1-FNTBB4DL54 471 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TRDCB7Z8K6 153 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 MKRN2OSH3BPM6 223 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 GABRPO00591 440 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TNFRSF10BO14763 440 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 FFAR3O14843 346 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 GPR42O15529 346 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TXNL1O43396 289 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TGM5O43548 720 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 VEGFDO43915 354 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 TLR5O60602 858 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 MSCO60682 206 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 SPDEFO95238 335 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 KCNK5O95279 499 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 CLTBP09497 229 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 CSF1P09603 554 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 RAB40ALP0C0E4 278 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 METTL15P1P0C7V9 234 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 SLC25A4P12235 298 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 RNH1P13489 461 aaKnown RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 HSD3B1P14060 373 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 FGF7P21781 194 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 UQCRC2P22695 453 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 HSD3B2P26439 372 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 HTR2CP28335 458 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 MPGP29372 298 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 MAT2AP31153 395 aaKnown RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 CSF2RBP32927 897 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 BTCP35070 178 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 CHI3L1P36222 383 aaPredicted RBP5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 MAGEB1P43366 347 aa5.27□□□□□ -1.57
VTI1BP4-201ENST00000427516 HTR5AP47898 357 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms