RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 KRT34O76011 436 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 WISP2O76076 250 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 SOX30O94993 753 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 KCNK2O95069 426 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 UNC5CO95185 931 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 RASAL1O95294 804 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 IL33O95760 270 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 FAM107AO95990 144 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 OR12D1P0DN82 309 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 CYP4B1P13584 511 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 PTGDSP41222 190 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 CASP3P42574 277 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 CASP9P55211 416 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 RPS26P62854 115 aaKnown RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 PSPHP78330 225 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 MRPS22P82650 360 aaKnown RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 PLCXD2Q0VAA5 305 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 FOXO1Q12778 655 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 INPP5JQ15735 1006 aaPredicted RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 AP1ARQ63HQ0 302 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 ZNF324BQ6AW86 544 aaPredicted RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 HEPHL1Q6MZM0 1159 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 TMEM81Q6P7N7 255 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 BHLHB9Q6PI77 547 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 SZRD1Q7Z422 152 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 MTDHQ86UE4 582 aaKnown RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 DPP10Q8N608 796 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 TMEM178AQ8NBL3 297 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 FAM13CQ8NE31 585 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 OR2M7Q8NG81 312 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 OR5D16Q8NGK9 328 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 OR5M3Q8NGP4 307 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 FBXO30Q8TB52 745 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 GPR151Q8TDV0 419 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 DIO2Q92813 273 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 CDS1Q92903 461 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 RAB8BQ92930 207 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 TMEM125Q96AQ2 219 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 EFHD2Q96C19 240 aaPredicted RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 SNRNP40Q96DI7 357 aaKnown RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 SLC35G5Q96KT7 338 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 C5orf34Q96MH7 638 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 COL21A1Q96P44 957 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 ADOQ96SZ5 270 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 SDF2Q99470 211 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 BARD1Q99728 777 aaKnown RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 BTBD2Q9BX70 525 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 ANGPTL4Q9BY76 406 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 OR51I1Q9H343 314 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 TPT1P8Q9HAU6 139 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 SACM1LQ9NTJ5 587 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 MRGBPQ9NV56 204 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 CNIH4Q9P003 139 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 ARMCX1Q9P291 453 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 LEF1Q9UJU2 399 aaPredicted RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 FAF1Q9UNN5 650 aaPredicted RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 ARL2BPQ9Y2Y0 163 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 KLF13Q9Y2Y9 288 aaPredicted RBP6.79□□□□□ -1.32
LINC01049-201ENST00000426840 NDUFAF1Q9Y375 327 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 OR10H1Q9Y4A9 318 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 GMEB1Q9Y692 573 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 SPTA1P02549 2419 aa6.79□□□□□ -1.32
LINC01049-201ENST00000426840 PCNX3Q9H6A9 2034 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 A0A0G2JMM0 328 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 A0A1W2PPB8 328 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 A0A1W2PRS3 328 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 DUXAA6NLW8 204 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 KIR3DP1A8MWS1 328 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 G3V3Y1 287 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 KLRC4-KLRK1H3BQV0 150 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 CLIC1O00299 241 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 TP53I11O14683 189 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 ICOSLGO75144 302 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 KCNH1O95259 989 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 ANP32DO95626 131 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 KRT75O95678 551 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 P04436 131 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 KRT16P08779 473 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 CELA3AP09093 270 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 LCN1P31025 176 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 KRT20P35900 424 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 CHI3L1P36222 383 aaPredicted RBP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 MAGEA8P43361 318 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 DNASE1L1P49184 302 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 TMED10P49755 219 aaKnown RBP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 MEOX1P50221 254 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 GAS1P54826 345 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 MLLT10P55197 1068 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 GPR85P60893 370 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 POU6F2P78424 691 aaPredicted RBP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 PMP22Q01453 160 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 EFR3AQ14156 821 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 MAPK11Q15759 364 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 DECR1Q16698 335 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 ARHGAP11BQ3KRB8 267 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 PRR30Q53SZ7 412 aaPredicted RBP6.78□□□□□ -1.32
LINC01049-201ENST00000426840 RUNDC3AQ59EK9 446 aa6.78□□□□□ -1.32
LINC01049-201ENST00000426840 C6orf10Q5SRN2 563 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms