RNA–Protein interactions for RNA: ENST00000425203.1

LIMK2-205, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best)

Gene LIMK2, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-205ENST00000425203 OR7G2Q8NG99 324 aa13.47□□□□□ -0.25
LIMK2-205ENST00000425203 RTN4RQ9BZR6 473 aa13.47□□□□□ -0.25
LIMK2-205ENST00000425203 FAM120CQ9NX05 1096 aaKnown RBP13.47□□□□□ -0.25
LIMK2-205ENST00000425203 SENP1Q9P0U3 644 aa13.47□□□□□ -0.25
LIMK2-205ENST00000425203 MRTO4Q9UKD2 239 aaKnown RBP13.47□□□□□ -0.25
LIMK2-205ENST00000425203 CLEC4AQ9UMR7 237 aa13.47□□□□□ -0.25
LIMK2-205ENST00000425203 CADP27708 2225 aa13.47□□□□□ -0.25
LIMK2-205ENST00000425203 EIF1AYO14602 144 aaKnown RBP13.46□□□□□ -0.25
LIMK2-205ENST00000425203 SS18L1O75177 396 aaPredicted RBP13.46□□□□□ -0.25
LIMK2-205ENST00000425203 COQ9O75208 318 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 SNRPAP09012 282 aaKnown RBP13.46□□□□□ -0.25
LIMK2-205ENST00000425203 DANCRP0C864 163 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 HSD3B1P14060 373 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 HSD3B2P26439 372 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 SLC6A8P48029 635 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 PSMD4P55036 377 aaKnown RBP13.46□□□□□ -0.25
LIMK2-205ENST00000425203 CDH13P55290 713 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 TMEM44Q2T9K0 475 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 PPP4R4Q6NUP7 873 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 RPS27LQ71UM5 84 aaKnown RBP13.46□□□□□ -0.25
LIMK2-205ENST00000425203 GGNQ86UU5 652 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 EXOC3L1Q86VI1 746 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 FAM9CQ8IZT9 166 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 LILRB1Q8NHL6 650 aaPredicted RBP13.46□□□□□ -0.25
LIMK2-205ENST00000425203 GTPBP3Q969Y2 492 aaKnown RBP13.46□□□□□ -0.25
LIMK2-205ENST00000425203 HBEGFQ99075 208 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 HDHD5Q9BXW7 423 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 SHCBP1LQ9BZQ2 653 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 YAE1D1Q9NRH1 226 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 ZNF225Q9UK10 706 aa13.46□□□□□ -0.25
LIMK2-205ENST00000425203 MCTS1Q9ULC4 181 aaKnown RBP13.46□□□□□ -0.25
LIMK2-205ENST00000425203 A0A087WV62 115 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 GNG14A0A1W2PPG7 69 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 KRT6AP02538 564 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 KRT6BP04259 564 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 RPS17P08708 135 aaKnown RBP13.45□□□□□ -0.26
LIMK2-205ENST00000425203 KRT6CP48668 564 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 SLC29A2Q14542 456 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 TSNAXIP1Q2TAA8 658 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 CTU2Q2VPK5 515 aaKnown RBP13.45□□□□□ -0.26
LIMK2-205ENST00000425203 LGSNQ5TDP6 509 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 GTF2IRD2BQ6EKJ0 949 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 GTF2IRD2Q86UP8 949 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 WDR75Q8IWA0 830 aaKnown RBP13.45□□□□□ -0.26
LIMK2-205ENST00000425203 STEAP2Q8NFT2 490 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 OR10D3Q8NH80 312 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 RAB3IL1Q8TBN0 382 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 ZNF483Q8TF39 744 aaPredicted RBP13.45□□□□□ -0.26
LIMK2-205ENST00000425203 C16orf78Q8WTQ4 265 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 SMAP2Q8WU79 429 aaPredicted RBP13.45□□□□□ -0.26
LIMK2-205ENST00000425203 FBXW5Q969U6 566 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 BBS4Q96RK4 519 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 TACO1Q9BSH4 297 aaKnown RBP13.45□□□□□ -0.26
LIMK2-205ENST00000425203 C1QTNF3Q9BXJ4 246 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 SLCO5A1Q9H2Y9 848 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 Q9N2J8 555 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 NGBQ9NPG2 151 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 FLRT3Q9NZU0 649 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 XPR1Q9UBH6 696 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 C19orf53Q9UNZ5 99 aaPredicted RBP13.45□□□□□ -0.26
LIMK2-205ENST00000425203 RNF115Q9Y4L5 304 aa13.45□□□□□ -0.26
LIMK2-205ENST00000425203 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.45□□□□□ -0.261e-6■■■■□ 24
LIMK2-205ENST00000425203 IGLV3-32A0A0A0MS00 114 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 MANBAO00462 879 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 ADAMDEC1O15204 470 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 PCDH7O60245 1069 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 ULK1O75385 1050 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 SLITRK5O94991 958 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 OR4F21O95013 312 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 SYNGR4O95473 234 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 IL33O95760 270 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 ANGPTL1O95841 491 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 SOD3P08294 240 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 COL6A2P12110 1019 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 TSPAN8P19075 237 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 ACVR1BP36896 505 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 HSD17B3P37058 310 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 RAE1P78406 368 aaKnown RBP13.44□□□□□ -0.26
LIMK2-205ENST00000425203 PRR5P85299 388 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 ZNF155Q12901 538 aaPredicted RBP13.44□□□□□ -0.26
LIMK2-205ENST00000425203 CSTF3Q12996 717 aaKnown RBP13.44□□□□□ -0.26
LIMK2-205ENST00000425203 CHRFAM7AQ494W8 412 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 ALKBH2Q6NS38 261 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 DNAJC14Q6Y2X3 702 aaPredicted RBP13.44□□□□□ -0.26
LIMK2-205ENST00000425203 ZBED6CLQ96FA7 236 aaPredicted RBP13.44□□□□□ -0.26
LIMK2-205ENST00000425203 MRPL57Q9BQC6 102 aaKnown RBP13.44□□□□□ -0.26
LIMK2-205ENST00000425203 TBL1XR1Q9BZK7 514 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 ESRP2Q9H6T0 727 aaKnown RBP13.44□□□□□ -0.26
LIMK2-205ENST00000425203 HHATLQ9HCP6 504 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 LIPT1Q9Y234 373 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 SNX8Q9Y5X2 465 aa13.44□□□□□ -0.26
LIMK2-205ENST00000425203 A0A087WZY1 265 aa13.43□□□□□ -0.26
LIMK2-205ENST00000425203 A8MV72 311 aaPredicted RBP13.43□□□□□ -0.26
LIMK2-205ENST00000425203 MYO1GB0I1T2 1018 aa13.43□□□□□ -0.26
LIMK2-205ENST00000425203 SHISA8B8ZZ34 492 aa13.43□□□□□ -0.26
LIMK2-205ENST00000425203 CLOCKO15516 846 aa13.43□□□□□ -0.26
LIMK2-205ENST00000425203 CXCL13O43927 109 aa13.43□□□□□ -0.26
LIMK2-205ENST00000425203 FESP07332 822 aa13.43□□□□□ -0.26
LIMK2-205ENST00000425203 THBS1P07996 1170 aa13.43□□□□□ -0.26
LIMK2-205ENST00000425203 CHN1P15882 459 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms