RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ZNF131P52739 623 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 DSTNP60981 165 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 POLR2FP61218 127 aaKnown RBP2.67□□□□□ -1.98
LINC01040-201ENST00000425048 BNIP1Q12981 228 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 RESP18Q5W5W9 173 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 WDR25Q64LD2 544 aaPredicted RBP2.67□□□□□ -1.98
LINC01040-201ENST00000425048 CTRB2Q6GPI1 263 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 SPOPLQ6IQ16 392 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 TTC23LQ6PF05 361 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 PRPF39Q86UA1 669 aaKnown RBP2.67□□□□□ -1.98
LINC01040-201ENST00000425048 SPATA24Q86W54 205 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 NUP93Q8N1F7 819 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 MMGT1Q8N4V1 131 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 TRIML2Q8N7C3 387 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 FAM133AQ8N9E0 248 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 CCDC197Q8NCU1 140 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 ADAMTS16Q8TE57 1224 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 DNAJC9Q8WXX5 260 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 ANKRD36BP1Q96IX9 119 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 COG3Q96JB2 828 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 ATP6V1G3Q96LB4 118 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 ZNF317Q96PQ6 595 aaPredicted RBP2.67□□□□□ -1.98
LINC01040-201ENST00000425048 ERGIC2Q96RQ1 377 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 NAPGQ99747 312 aaPredicted RBP2.67□□□□□ -1.98
LINC01040-201ENST00000425048 NDEL1Q9GZM8 345 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 FANCEQ9HB96 536 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 TMBIM4Q9HC24 238 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 HYPKQ9NX55 129 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 CYP39A1Q9NYL5 469 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 PRODH2Q9UF12 536 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 EXOC7Q9UPT5 735 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 CFL2Q9Y281 166 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 MYO5BQ9ULV0 1848 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 CHD1O14646 1710 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 DDX60Q8IY21 1712 aaKnown RBP2.67□□□□□ -1.98
LINC01040-201ENST00000425048 PARP4Q9UKK3 1724 aaKnown RBP2.67□□□□□ -1.98
LINC01040-201ENST00000425048 CAMSAP1Q5T5Y3 1602 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 ANKARQ7Z5J8 1434 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 TANC1Q9C0D5 1861 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 ACEP12821 1306 aa2.67□□□□□ -1.98
LINC01040-201ENST00000425048 SMIM31A0A1B0GVY4 71 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 FUOMA2VDF0 154 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 CCSO14618 274 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 NVLO15381 856 aaKnown RBP2.66□□□□□ -1.98
LINC01040-201ENST00000425048 NMT2O60551 498 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 HSF2BPO75031 334 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 ATP9AO75110 1047 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 STARD3NLO95772 234 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 PAHP00439 452 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 CCNB1P14635 433 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 CFL1P23528 166 aaKnown RBP2.66□□□□□ -1.98
LINC01040-201ENST00000425048 HMOX2P30519 316 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 RCVRNP35243 200 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 VHLP40337 213 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 HAAOP46952 286 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 BCAP31P51572 246 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 RCN2Q14257 317 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 GNA13Q14344 377 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 CYTH1Q15438 398 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 TGFBIQ15582 683 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 IL17AQ16552 155 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 PARP6Q2NL67 630 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 LYPLAL1Q5VWZ2 237 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 FAM219BQ5XKK7 198 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 LRRC8BQ6P9F7 803 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 DHRS4L2Q6PKH6 230 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 UNC5DQ6UXZ4 953 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 TRPM8Q7Z2W7 1104 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 MEX3DQ86XN8 651 aaKnown RBP2.66□□□□□ -1.98
LINC01040-201ENST00000425048 ERI1Q8IV48 349 aaKnown RBP2.66□□□□□ -1.98
LINC01040-201ENST00000425048 TDHQ8IZJ6 230 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 CHCHD4Q8N4Q1 142 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 ARFGAP2Q8N6H7 521 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 NATD1Q8N6N6 113 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 GVQW1Q8N7I0 195 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 NELFBQ8WX92 580 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 SEPT8Q92599 483 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 CDKL2Q92772 493 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 EFHD2Q96C19 240 aaPredicted RBP2.66□□□□□ -1.98
LINC01040-201ENST00000425048 DNAJC1Q96KC8 554 aaKnown RBP2.66□□□□□ -1.98
LINC01040-201ENST00000425048 OLFM3Q96PB7 478 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 XPO6Q96QU8 1125 aaKnown RBP2.66□□□□□ -1.98
LINC01040-201ENST00000425048 CENPKQ9BS16 269 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 NSRP1Q9H0G5 558 aaKnown RBP2.66□□□□□ -1.98
LINC01040-201ENST00000425048 WWP1Q9H0M0 922 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 RAB17Q9H0T7 212 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 DPH5Q9H2P9 285 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 ECT2Q9H8V3 914 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 ZNF702PQ9H963 129 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 FAM114A2Q9NRY5 505 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 NMRK1Q9NWW6 199 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 APOBEC3BQ9UH17 382 aaKnown RBP2.66□□□□□ -1.98
LINC01040-201ENST00000425048 MOSPD1Q9UJG1 213 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 STX8Q9UNK0 236 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 RPL26L1Q9UNX3 145 aaKnown RBP2.66□□□□□ -1.98
LINC01040-201ENST00000425048 ZNF175Q9Y473 711 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 MROH1Q8NDA8 1641 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 MYO3AQ8NEV4 1616 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 MADDQ8WXG6 1647 aa2.66□□□□□ -1.98
LINC01040-201ENST00000425048 CC2D2AQ9P2K1 1620 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms