RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 PXDC1Q5TGL8 231 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 PTCRAQ6ISU1 281 aaPredicted RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 OR4N4Q8N0Y3 316 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 PLA2G15Q8NCC3 412 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 ZNF680Q8NEM1 530 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 BEST4Q8NFU0 473 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 SECISBP2Q96T21 854 aaKnown RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 LHX9Q9NQ69 397 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 IMP3Q9NV31 184 aaKnown RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 FAM170BA6NMN3 283 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 A8MUA0 341 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 SOCS6O14544 535 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 LZTS3O60299 673 aaPredicted RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 RFPL3O75679 317 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 APODP05090 189 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 CTHP32929 405 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 BSGP35613 385 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 PCBP4P57723 403 aaKnown RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 FUT5Q11128 374 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 COX10Q12887 443 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 CDONQ4KMG0 1287 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 PLA1AQ53H76 456 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 ENTPD8Q5MY95 495 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 PIP5KL1Q5T9C9 394 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 MTFR2Q6P444 385 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 TEX261Q6UWH6 196 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 METTL3Q86U44 580 aaKnown RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 GPR135Q8IZ08 494 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 ZNF655Q8N720 491 aaPredicted RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 OR5AR1Q8NGP9 310 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 MACROD1Q9BQ69 325 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 THAP7Q9BT49 309 aaPredicted RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 MED28Q9H204 178 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 BEX1Q9HBH7 125 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 IL36AQ9UHA7 158 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 U3KQ87 197 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 SPEGQ15772 3267 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 I3L521 148 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 GPR4P46093 362 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 PRAMEF14Q5SWL7 426 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 PRAMEF13Q5VWM6 474 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 IKBIPQ70UQ0 350 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 BPHLQ86WA6 291 aaPredicted RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 WFIKKN2Q8TEU8 576 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 CREB3L1Q96BA8 519 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 SLC6A17Q9H1V8 727 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 DDX31Q9H8H2 851 aaKnown RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 ZCCHC3Q9NUD5 404 aaKnown RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 MRPS18AQ9NVS2 196 aaKnown RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 B3GNT2Q9NY97 397 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 TAC3Q9UHF0 121 aa13.41□□□□□ -0.26
MSH5-206ENST00000423982 EXOSC1Q9Y3B2 195 aaKnown RBP13.41□□□□□ -0.26
MSH5-206ENST00000423982 DENND4AQ7Z401 1863 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 SHOXO15266 292 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 HLA-DPB1P04440 258 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 SERPIND1P05546 499 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 ELFN1P0C7U0 828 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 UBL4AP11441 157 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 SHC1P29353 583 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 ATP6V1E1P36543 226 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 AP2S1P53680 142 aaPredicted RBP13.4□□□□□ -0.26
MSH5-206ENST00000423982 SMIM11AP58511 58 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 DCDC1P59894 354 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 STXBP1P61764 594 aaKnown RBP13.4□□□□□ -0.26
MSH5-206ENST00000423982 ZNF658BQ4V348 819 aaPredicted RBP13.4□□□□□ -0.26
MSH5-206ENST00000423982 KHDRBS2Q5VWX1 349 aaKnown RBP13.4□□□□□ -0.26
MSH5-206ENST00000423982 CD300LDQ6UXZ3 194 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 FAM83HQ6ZRV2 1179 aaPredicted RBP13.4□□□□□ -0.26
MSH5-206ENST00000423982 SIRT6Q8N6T7 355 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 SAMD12Q8N8I0 201 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 SMAP2Q8WU79 429 aaPredicted RBP13.4□□□□□ -0.26
MSH5-206ENST00000423982 C16orf58Q96GQ5 468 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 ABHD1Q96SE0 405 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 ENAMQ9NRM1 1142 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 SEMA4GQ9NTN9 838 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 P2RX2Q9UBL9 471 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 ELF5Q9UKW6 265 aaPredicted RBP13.4□□□□□ -0.26
MSH5-206ENST00000423982 LIPT1Q9Y234 373 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 PRELID1Q9Y255 219 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 FRYLO94915 3013 aa13.4□□□□□ -0.26
MSH5-206ENST00000423982 EGFP01133 1207 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 PDGFAP04085 211 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 NUDT1P36639 197 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 FGFBP1Q14512 234 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 LASP1Q14847 261 aaKnown RBP13.4□□□□□ -0.27
MSH5-206ENST00000423982 METAP1DQ6UB28 335 aaPredicted RBP13.4□□□□□ -0.27
MSH5-206ENST00000423982 FAM129CQ86XR2 697 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 ZNF547Q8IVP9 402 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 LRRC20Q8TCA0 184 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 DNAJA4Q8WW22 397 aaPredicted RBP13.4□□□□□ -0.27
MSH5-206ENST00000423982 NACC2Q96BF6 587 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 SLC35G5Q96KT7 338 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 GPR137Q96N19 417 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 DPCDQ9BVM2 203 aaPredicted RBP13.4□□□□□ -0.27
MSH5-206ENST00000423982 PHF7Q9BWX1 381 aaPredicted RBP13.4□□□□□ -0.27
MSH5-206ENST00000423982 HEXA-AS1Q9H8Q6 139 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 MED20Q9H944 212 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 PTGFRNQ9P2B2 879 aa13.4□□□□□ -0.27
MSH5-206ENST00000423982 ZNF624Q9P2J8 865 aaPredicted RBP13.4□□□□□ -0.27
MSH5-206ENST00000423982 EIF3KQ9UBQ5 218 aaKnown RBP13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms