RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 STMN1P16949 149 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 GNAZP19086 355 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 FKBP2P26885 142 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 DUSP1P28562 367 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CTGFP29279 349 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 STAT5AP42229 794 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 FASLGP48023 281 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ARPC4P59998 168 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ADAM17P78536 824 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 IL13RA1P78552 427 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 POU6F1Q14863 301 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 FASTKD3Q14CZ7 662 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CCSAPQ6IQ19 270 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 FAM45BPQ6NSW5 357 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ALKBH5Q6P6C2 394 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF549Q6P9A3 640 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 AAED1Q7RTV5 226 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 MRGPREQ86SM8 312 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF554Q86TJ5 538 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SLCO6A1Q86UG4 719 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 OR2L2Q8NH16 312 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 FBXO27Q8NI29 283 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 FAM45AQ8TCE6 357 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 STYXQ8WUJ0 223 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 HTR3CQ8WXA8 447 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 NR4A3Q92570 626 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 LPGAT1Q92604 370 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 MTERF3Q96E29 417 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 KREMEN1Q96MU8 473 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 C7orf50Q9BRJ6 194 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SFXN3Q9BWM7 321 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SLC26A1Q9H2B4 701 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 C12orf10Q9HB07 376 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 HIF3AQ9Y2N7 669 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 NBASA2RRP1 2371 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 BTN3A3O00478 584 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 EIF1BO60739 113 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ZSCAN5DPP0CG00 497 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 NDUFB7P17568 137 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 GSTM2P28161 218 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SFTPDP35247 375 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CAPZBP47756 277 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SERPINB9P50453 376 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 RGS8P57771 180 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CSNK1G2P78368 415 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 MERTKQ12866 999 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CBFBQ13951 182 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 RNPS1Q15287 305 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 DPY19L1Q2PZI1 675 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ACER2Q5QJU3 275 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 FBXL22Q6P050 247 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 WDR74Q6RFH5 385 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CYHR1Q6ZMK1 362 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 KIAA0408Q6ZU52 694 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 LINGO2Q7L985 606 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 LRRTM3Q86VH5 581 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 TTC9BQ8N6N2 239 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 OR51Q1Q8NH59 317 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 MVB12AQ96EY5 273 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 STRA6Q9BX79 667 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 PINK1Q9BXM7 581 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 XKR8Q9H6D3 395 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 TCF7L2Q9NQB0 619 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 RAB6BQ9NRW1 208 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 FBXO2Q9UK22 296 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 AMMECR1Q9Y4X0 333 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SIRT4Q9Y6E7 314 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 A0A1B0GTH9 108 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 A0A1B0GTL3 188 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 A0A1W2PPL8 197 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SOCS6O14544 535 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 BET1O15155 118 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 VSIG10L2P0DP72 767 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 OGNP20774 298 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 HIST1H1TP22492 207 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ARRB2P32121 409 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 KCNJ1P48048 391 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 FASTKQ14296 549 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 GRB7Q14451 532 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF273Q14593 569 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ACKR1Q16570 336 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CYP51A1Q16850 503 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 DEFB113Q30KQ7 82 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF718Q3SXZ3 478 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SLC36A1Q7Z2H8 476 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 TRPM8Q7Z2W7 1104 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 P2RY8Q86VZ1 359 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SLC22A9Q8IVM8 553 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 IGDCC3Q8IVU1 814 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SLC35F3Q8IY50 421 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 TIGD4Q8IY51 512 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CCDC36Q8IYA8 594 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 MMP21Q8N119 569 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 AMER3Q8N944 861 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ANKRD42Q8N9B4 389 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 GOLM1Q8NBJ4 401 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 RHEBL1Q8TAI7 183 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 TBC1D20Q96BZ9 403 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 RNFT2Q96EX2 444 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ZMAT2Q96NC0 199 aaKnown RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms