RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 GFM2Q969S9 779 aaKnown RBP15.64■□□□□ 0.09
MSH6-203ENST00000420813 PGM2Q96G03 612 aa15.64■□□□□ 0.09
MSH6-203ENST00000420813 PINK1Q9BXM7 581 aa15.64■□□□□ 0.09
MSH6-203ENST00000420813 LRTM1Q9HBL6 345 aa15.64■□□□□ 0.09
MSH6-203ENST00000420813 STOML1Q9UBI4 398 aa15.64■□□□□ 0.09
MSH6-203ENST00000420813 NUP214P35658 2090 aaPredicted RBP15.64■□□□□ 0.09
MSH6-203ENST00000420813 RAI1Q7Z5J4 1906 aaPredicted RBP15.64■□□□□ 0.09
MSH6-203ENST00000420813 COPEO14579 308 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 AZIN1O14977 448 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 CTIFO43310 598 aaKnown RBP15.63■□□□□ 0.09
MSH6-203ENST00000420813 NKX2-2O95096 273 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 SHBGP04278 402 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 NGFRP08138 427 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 FCGR2AP12318 317 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 GPC1P35052 558 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 RFX3P48380 749 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 CLDN20P56880 219 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 PON3Q15166 354 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 GUSBP1Q15486 140 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 TMEM44Q2T9K0 475 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 CLEC6AQ6EIG7 209 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 ZNF474Q6S9Z5 364 aaPredicted RBP15.63■□□□□ 0.09
MSH6-203ENST00000420813 GSPT2Q8IYD1 628 aaKnown RBP15.63■□□□□ 0.09
MSH6-203ENST00000420813 CDRT4Q8N9R6 151 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 WFDC11Q8NEX6 87 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 OR5M1Q8NGP8 315 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 FNDC9Q8TBE3 224 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 ZBED6CLQ96FA7 236 aaPredicted RBP15.63■□□□□ 0.09
MSH6-203ENST00000420813 ZNF845Q96IR2 970 aaPredicted RBP15.63■□□□□ 0.09
MSH6-203ENST00000420813 FAM111AQ96PZ2 611 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 SLC39A3Q9BRY0 314 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 TRMOQ9BU70 441 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 REEP4Q9H6H4 257 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 ZNF226Q9NYT6 803 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 NTMQ9P121 344 aa15.63■□□□□ 0.09
MSH6-203ENST00000420813 GXYLT2A0PJZ3 443 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 ALG1L2C9J202 215 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 H0YC42 278 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 CGAP01215 116 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 IGKV1D-16P01601 117 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 POU2F1P14859 743 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 ZNF17P17021 662 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 HOXB4P17483 251 aaPredicted RBP15.62■□□□□ 0.09
MSH6-203ENST00000420813 SDC1P18827 310 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 CRYGSP22914 178 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 UGT2B10P36537 528 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 FRKP42685 505 aaPredicted RBP15.62■□□□□ 0.09
MSH6-203ENST00000420813 TPD52P55327 224 aaPredicted RBP15.62■□□□□ 0.09
MSH6-203ENST00000420813 PDE7AQ13946 482 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 GRAMD1BQ3KR37 738 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 SHEQ5VZ18 495 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 APOOLQ6UXV4 268 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 Q6ZSR9 355 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 GPR151Q8TDV0 419 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 PIK3R3Q92569 461 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 PPCDCQ96CD2 204 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 WFIKKN1Q96NZ8 548 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 OPN3Q9H1Y3 402 aaPredicted RBP15.62■□□□□ 0.09
MSH6-203ENST00000420813 EQTNQ9NQ60 294 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 ACSS1Q9NUB1 689 aaPredicted RBP15.62■□□□□ 0.09
MSH6-203ENST00000420813 TMED5Q9Y3A6 229 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 PTGDR2Q9Y5Y4 395 aa15.62■□□□□ 0.09
MSH6-203ENST00000420813 A0A087WZY1 265 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 DEFB108AA8MXU0 73 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 CHEK2O96017 543 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 KRT4P19013 534 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 LCN1P31025 176 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 CCKARP32238 428 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 SIRPAP78324 504 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 SLC18A2Q05940 514 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.61■□□□□ 0.09
MSH6-203ENST00000420813 ZNF385BQ569K4 471 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 ANKRD26P1Q6NSI1 321 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 ZCCHC12Q6PEW1 402 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 FAM214BQ7L5A3 538 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 BIVMQ86UB2 503 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 GGNQ86UU5 652 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 CXorf67Q86X51 503 aaPredicted RBP15.61■□□□□ 0.09
MSH6-203ENST00000420813 KRTAP1-3Q8IUG1 177 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 NUP43Q8NFH3 380 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 OR6Y1Q8NGX8 325 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 OR2T11Q8NH01 316 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 UBLCP1Q8WVY7 318 aaPredicted RBP15.61■□□□□ 0.09
MSH6-203ENST00000420813 CIDECQ96AQ7 238 aaPredicted RBP15.61■□□□□ 0.09
MSH6-203ENST00000420813 MTERF3Q96E29 417 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 MS4A4EQ96PG1 132 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 PIP5K1AQ99755 562 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 MED18Q9BUE0 208 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 C12orf65Q9H3J6 166 aaKnown RBP15.61■□□□□ 0.09
MSH6-203ENST00000420813 PAQR5Q9NXK6 330 aaPredicted RBP15.61■□□□□ 0.09
MSH6-203ENST00000420813 KLHL28Q9NXS3 571 aa15.61■□□□□ 0.09
MSH6-203ENST00000420813 C6orf203Q9P0P8 240 aaPredicted RBP15.61■□□□□ 0.09
MSH6-203ENST00000420813 ROS1P08922 2347 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 NSD1Q96L73 2696 aaPredicted RBP15.6■□□□□ 0.09
MSH6-203ENST00000420813 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 C7orf72A4D263 438 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 C16orf97H3BN30 126 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 SIAH2O43255 324 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 NDUFB5O43674 189 aa15.6■□□□□ 0.09
MSH6-203ENST00000420813 ZNF500O60304 480 aaPredicted RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms