RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 IPMKQ8NFU5 416 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 HAVCR1Q96D42 359 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 GLT8D2Q9H1C3 349 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 GPN2Q9H9Y4 310 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 HPF1Q9NWY4 346 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 GDAP2Q9NXN4 497 aa2.91□□□□□ -1.94
HMGB1P49-201ENST00000418882 IGKV6D-21A0A0A0MT36 114 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 RGSL1A5PLK6 1076 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 KRT87PA6NCN2 255 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 SAGE2PA6NJ88 616 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 K7ENP7 123 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 EMC8O43402 210 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 NDUFA7O95182 113 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 IGLV1-47P01700 117 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 PTMAP06454 111 aaKnown RBP2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 FUT3P21217 361 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 CDH5P33151 784 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 HSPA1LP34931 641 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 NF2P35240 595 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 RBMXP38159 391 aaKnown RBP2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 RABIFP47224 123 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 STARP49675 285 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 ZNF133P52736 654 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 HERVK_113P63132 956 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 ERVK-8P63133 956 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 BCL2L1Q07817 233 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 KYAT1Q16773 422 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 OR2B11Q5JQS5 317 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 ISLR2Q6UXK2 745 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 TFAP2EQ6VUC0 442 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 TAF8Q7Z7C8 310 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 CADM2Q8N3J6 435 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 DQX1Q8TE96 717 aaKnown RBP2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 SETD7Q8WTS6 366 aaKnown RBP2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 PSMG2Q969U7 264 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 MCHR2Q969V1 340 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 TMEM121Q9BTD3 319 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 ERVK-6Q9BXR3 956 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 EHD1Q9H4M9 534 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 NINJ2Q9NZG7 142 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 CNOT2Q9NZN8 540 aaKnown RBP2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 BCAP29Q9UHQ4 241 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 MOSPD1Q9UJG1 213 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 ZNF490Q9ULM2 529 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 RABL2BQ9UNT1 228 aa2.9□□□□□ -1.95
HMGB1P49-201ENST00000418882 SYCE3A1L190 88 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 RNF222A6NCQ9 220 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 K7EPI3 171 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 PRPSAP2O60256 369 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 SFNP31947 248 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 EGFEM1PQ0D2K5 195 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 ZNF154Q13106 437 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 TFDP1Q14186 410 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 KCNJ11Q14654 390 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 CCDC14Q49A88 953 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 Q7L0L9 218 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 ERI1Q8IV48 349 aaKnown RBP2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 BPIFB2Q8N4F0 458 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 ZBTB44Q8NCP5 570 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 RNF138Q8WVD3 245 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 TAF4BQ92750 862 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 ATP6V0A1Q93050 837 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 ZNF799Q96GE5 643 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 TMEM80Q96HE8 168 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 IL4I1Q96RQ9 567 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 TBC1D10AQ9BXI6 508 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 KRTAP4-3Q9BYR4 195 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 NACA2Q9H009 215 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 P2RX2Q9UBL9 471 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 XPO7Q9UIA9 1087 aaKnown RBP2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 NEU3Q9UQ49 428 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 GRIN2DO15399 1336 aa2.89□□□□□ -1.95
HMGB1P49-201ENST00000418882 ANKRD30BQ9BXX2 1392 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 RLFQ13129 1914 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 CFAP73A6NFT4 308 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 E9PLD3 99 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 E9PMD0 336 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 SGK494L7N484 410 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 SMPD2O60906 423 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 TIMP1P01033 207 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 CD55P08174 381 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 XRCC1P18887 633 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 MAPK3P27361 379 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 TDO2P48775 406 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 HLCSP50747 726 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 CAV2P51636 162 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 WNT4P56705 351 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 RPL32P62910 135 aaKnown RBP2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 RPL8P62917 257 aaKnown RBP2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 IL9RQ01113 521 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 KLHL30Q0D2K2 578 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 KARSQ15046 597 aaKnown RBP2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 CYBRD1Q53TN4 286 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 KRTAP5-5Q701N2 237 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 FRA10AC1Q70Z53 315 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 CYS1Q717R9 158 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 MINDY2Q8NBR6 621 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 OR9A4Q8NGU2 314 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 FAM104AQ969W3 186 aa2.88□□□□□ -1.95
HMGB1P49-201ENST00000418882 TADA1Q96BN2 335 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms