RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17■□□□□ 0.31
PTCD3-204ENST00000418628 EIF2S3LQ2VIR3 472 aaKnown RBP17■□□□□ 0.31
PTCD3-204ENST00000418628 ARHGAP11BQ3KRB8 267 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 AGKQ53H12 422 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 PAGE3Q5JUK9 113 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 RNF130Q86XS8 419 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 PLCZ1Q86YW0 608 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 SPPL2CQ8IUH8 684 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 OR1J4Q8NGS1 313 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 OR4C3Q8NH37 302 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 GNRHR2Q96P88 292 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 SDF2Q99470 211 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 OR2B2Q9GZK3 357 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 DEFB127Q9H1M4 99 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 SLC25A37Q9NYZ2 338 aa17■□□□□ 0.31
PTCD3-204ENST00000418628 A0A1W2PP18 115 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 C2orf72A6NCS6 295 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 AQP7O14520 342 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 GNB5O14775 395 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 HCN1O60741 890 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 SLC19A2O60779 497 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 AGR2O95994 175 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 NCF2P19878 526 aaPredicted RBP16.99■□□□□ 0.31
PTCD3-204ENST00000418628 GDF1P27539 372 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 LSP1P33241 339 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 CHI3L1P36222 383 aaPredicted RBP16.99■□□□□ 0.31
PTCD3-204ENST00000418628 RFX3P48380 749 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 KCNC4Q03721 635 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 ELOAQ14241 798 aaKnown RBP16.99■□□□□ 0.31
PTCD3-204ENST00000418628 COX20Q5RI15 118 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 ARHGAP11AQ6P4F7 1023 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 TNFAIP8L2Q6P589 184 aaPredicted RBP16.99■□□□□ 0.31
PTCD3-204ENST00000418628 ZNF621Q6ZSS3 439 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 DPP10Q8N608 796 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 JSRP1Q96MG2 331 aaPredicted RBP16.99■□□□□ 0.31
PTCD3-204ENST00000418628 NMUR2Q9GZQ4 415 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 TPT1P8Q9HAU6 139 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 SAR1AQ9NR31 198 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 UBQLN4Q9NRR5 601 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 MRGBPQ9NV56 204 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 FBXL2Q9UKC9 423 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 PCDHB14Q9Y5E9 798 aa16.99■□□□□ 0.31
PTCD3-204ENST00000418628 A0A1B0GTH9 108 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 OR14I1A6ND48 311 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 SCO2O43819 266 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 KIAA0513O60268 411 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 KRT75O95678 551 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 OR12D1P0DN82 309 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 CA7P43166 264 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 GYS2P54840 703 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 CASP9P55211 416 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 RBPJQ06330 500 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 SLC10A1Q14973 349 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.98■□□□□ 0.31
PTCD3-204ENST00000418628 NEIL3Q8TAT5 605 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 RAB8BQ92930 207 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 RELTQ969Z4 430 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 AURKBQ96GD4 344 aaPredicted RBP16.98■□□□□ 0.31
PTCD3-204ENST00000418628 SAP130Q9H0E3 1048 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 POLE3Q9NRF9 147 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 SLAMF8Q9P0V8 285 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 SPRR3Q9UBC9 169 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 KCNE5Q9UJ90 142 aa16.98■□□□□ 0.31
PTCD3-204ENST00000418628 MRPS18CQ9Y3D5 142 aaKnown RBP16.98■□□□□ 0.31
PTCD3-204ENST00000418628 ZNHIT1O43257 154 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 CBR3O75828 277 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 ANGPTL1O95841 491 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 BMP2P12643 396 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 DRD4P21917 467 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 DCTP40126 519 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 SEC24CP53992 1094 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 MAPK11Q15759 364 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 C4orf17Q53FE4 359 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 KLHL26Q53HC5 615 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 NHSL2Q5HYW2 709 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 C6orf10Q5SRN2 563 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 DLEU7Q6UYE1 221 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 FRRS1Q6ZNA5 592 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 MARCH3Q86UD3 253 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 RETREG3Q86VR2 466 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 FAM83FQ8NEG4 500 aaPredicted RBP16.97■□□□□ 0.31
PTCD3-204ENST00000418628 OR2M3Q8NG83 312 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 OIT3Q8WWZ8 545 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 SLC6A15Q9H2J7 730 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 EXD2Q9NVH0 621 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 VAPAQ9P0L0 249 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 PPP4R1LQ9P1A2 415 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 ERRFI1Q9UJM3 462 aaPredicted RBP16.97■□□□□ 0.31
PTCD3-204ENST00000418628 OSGIN2Q9Y236 505 aa16.97■□□□□ 0.31
PTCD3-204ENST00000418628 HCFC1P51610 2035 aa16.96■□□□□ 0.31
PTCD3-204ENST00000418628 TRGV5A0A0B4J1U4 118 aa16.96■□□□□ 0.31
PTCD3-204ENST00000418628 NPIPA5A0A0B4J1W7 369 aa16.96■□□□□ 0.31
PTCD3-204ENST00000418628 NPIPA7E9PJI5 369 aa16.96■□□□□ 0.31
PTCD3-204ENST00000418628 CDC40O60508 579 aaKnown RBP eCLIP16.96■□□□□ 0.31
PTCD3-204ENST00000418628 FCMRO60667 390 aa16.96■□□□□ 0.31
PTCD3-204ENST00000418628 SEMA7AO75326 666 aa16.96■□□□□ 0.31
PTCD3-204ENST00000418628 STX11O75558 287 aa16.96■□□□□ 0.31
PTCD3-204ENST00000418628 NPIPA8P0DM63 369 aa16.96■□□□□ 0.31
PTCD3-204ENST00000418628 ADSLP30566 484 aaPredicted RBP16.96■□□□□ 0.31
PTCD3-204ENST00000418628 SRD5A2P31213 254 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms