RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 HOXB13Q92826 284 aaPredicted RBP15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 OR2T1O43869 369 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 NXPH1P58417 271 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 CDKL1Q00532 357 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 ZDHHC24Q6UX98 284 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 P2RY8Q86VZ1 359 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 OR10A5Q9H207 317 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 TRAV17A0A0B4J275 112 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 ORC5O43913 435 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 ZNF227Q86WZ6 799 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 PLD6Q8N2A8 252 aaKnown RBP15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 PPP1R35Q8TAP8 253 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 APOBEC4Q8WW27 367 aaKnown RBP15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 CIDECQ96AQ7 238 aaPredicted RBP15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 ZNF778Q96MU6 729 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 C1QTNF2Q9BXJ5 285 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 ZNF221Q9UK13 617 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 ATP23Q9Y6H3 246 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 MAOAP21397 527 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 AHSA2Q719I0 299 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 IQCKQ8N0W5 287 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 PARP8Q8N3A8 854 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 GHRLQ9UBU3 117 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 SHANK3Q9BYB0 1731 aa15.91■□□□□ 0.14
SYNGAP1-202ENST00000418600 PRAMEF25A6NGN4 478 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 AIREO43918 545 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 RBM48Q5RL73 367 aaKnown RBP15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 SLC46A3Q7Z3Q1 461 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 WFDC8Q8IUA0 241 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 OR7A10O76100 309 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 ZNF829Q3KNS6 432 aaPredicted RBP15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 CPEB2Q7Z5Q1 589 aaKnown RBP15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 OR51A7Q8NH64 312 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 SFXN5Q8TD22 340 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 ASB11Q8WXH4 323 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 TRPV4Q9HBA0 871 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 GIMAP2Q9UG22 337 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 PCTPQ9UKL6 214 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 ACSL6Q9UKU0 697 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 NOBOXO60393 691 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 ATXN1LP0C7T5 689 aaKnown RBP15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 KCNC4Q03721 635 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 KIAA1614Q5VZ46 1190 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 LINGO2Q7L985 606 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 PMS2P1A4D2B8 440 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 NPPAP01160 153 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 DCTP40126 519 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 NKX3-2P78367 333 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 SLC35A1P78382 337 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 REEP5Q00765 189 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 METRNLQ641Q3 311 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 ASB18Q6ZVZ8 466 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 APIPQ96GX9 242 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 LCORQ96JN0 433 aaPredicted RBP15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 AASSQ9UDR5 926 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 MGAT4BQ9UQ53 548 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 CSF2P04141 144 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 PCLAFQ15004 111 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 ZFP69Q49AA0 526 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 AAED1Q7RTV5 226 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 RAB39BQ96DA2 213 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 NODALQ96S42 347 aa15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 TSPAN10Q9H1Z9 355 aaPredicted RBP15.9■□□□□ 0.14
SYNGAP1-202ENST00000418600 TARM1B6A8C7 271 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 CREG1O75629 220 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 GLP1RP43220 463 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 ATP4BP51164 291 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 NKAPLQ5M9Q1 402 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 KANK2Q63ZY3 851 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 SLC46A1Q96NT5 459 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 TTYH2Q9BSA4 534 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 DNTTIP1Q9H147 329 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 FAM90A27PA6NNH2 459 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 GPR39O43194 453 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 IL11RAQ14626 422 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 ZNF610Q8N9Z0 462 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 DUSP15Q9H1R2 295 aaPredicted RBP15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 CHST8Q9H2A9 424 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 ANKRA2Q9H9E1 313 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 PLEKHA6Q9Y2H5 1048 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 NPIPA5A0A0B4J1W7 369 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 A0A1W2PP18 115 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 NPIPA7E9PJI5 369 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 NUDT21O43809 227 aaKnown RBP15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 PLATP00750 562 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 NPIPA8P0DM63 369 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 AIMP2Q13155 320 aaKnown RBP15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 CRTC2Q53ET0 693 aaPredicted RBP15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 CES4AQ5XG92 561 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 STEAP4Q687X5 459 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 LEG1Q6P5S2 330 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 BORAQ6PGQ7 559 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 C3P1Q6ZMU1 363 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 OR52N2Q8NGI0 321 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 CCL4L1Q8NHW4 92 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 SLC19A3Q9BZV2 496 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 VNN3Q9NY84 501 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 A0A1W2PRQ8 180 aa15.89■□□□□ 0.13
SYNGAP1-202ENST00000418600 COL9A1P20849 921 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms